Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ZNF885P-201ENST00000420174 1098 ntBASIC1.97□□□□□ -2.09
BDNFP23560 DAP3P1-201ENST00000441522 278 ntBASIC1.97□□□□□ -2.09
BDNFP23560 AC007677.1-201ENST00000445757 515 ntBASIC1.97□□□□□ -2.09
BDNFP23560 HSPE1P24-201ENST00000450782 238 ntBASIC1.97□□□□□ -2.09
BDNFP23560 RPL26P26-201ENST00000480251 434 ntBASIC1.97□□□□□ -2.09
BDNFP23560 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.97□□□□□ -2.09
BDNFP23560 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.97□□□□□ -2.09
BDNFP23560 AC016957.1-201ENST00000534895 309 ntBASIC1.97□□□□□ -2.09
BDNFP23560 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.97□□□□□ -2.09
BDNFP23560 AC010525.2-201ENST00000590920 195 ntBASIC1.97□□□□□ -2.09
BDNFP23560 7SK.7-201ENST00000603504 247 ntBASIC1.97□□□□□ -2.09
BDNFP23560 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
BDNFP23560 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
BDNFP23560 RNU4-9P-201ENST00000364951 139 ntBASIC1.96□□□□□ -2.1
BDNFP23560 RNU6-245P-201ENST00000384020 107 ntBASIC1.96□□□□□ -2.1
BDNFP23560 RNU6-483P-201ENST00000384088 108 ntBASIC1.96□□□□□ -2.1
BDNFP23560 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.96□□□□□ -2.1
BDNFP23560 AC099677.2-201ENST00000436385 175 ntBASIC1.96□□□□□ -2.1
BDNFP23560 MTND2P22-201ENST00000444325 1033 ntBASIC1.96□□□□□ -2.1
BDNFP23560 AC245517.4-201ENST00000448601 281 ntBASIC1.96□□□□□ -2.1
BDNFP23560 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
BDNFP23560 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.96□□□□□ -2.1
BDNFP23560 DEFB131C-201ENST00000528817 165 ntBASIC1.96□□□□□ -2.1
BDNFP23560 ZNF519P2-201ENST00000557032 169 ntBASIC1.96□□□□□ -2.1
BDNFP23560 POLR3GP2-201ENST00000588366 668 ntBASIC1.96□□□□□ -2.1
BDNFP23560 RMST_3.1-201ENST00000611651 109 ntBASIC1.96□□□□□ -2.1
BDNFP23560 SCARNA4-201ENST00000629045 128 ntBASIC1.96□□□□□ -2.1
BDNFP23560 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.96□□□□□ -2.1
BDNFP23560 MIR1321-201ENST00000637766 79 ntBASIC1.96□□□□□ -2.1
BDNFP23560 Y_RNA.194-201ENST00000363985 102 ntBASIC1.95□□□□□ -2.1
BDNFP23560 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
BDNFP23560 MIR1253-201ENST00000408273 105 ntBASIC1.95□□□□□ -2.1
BDNFP23560 RNU6-373P-201ENST00000411247 98 ntBASIC1.95□□□□□ -2.1
BDNFP23560 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.95□□□□□ -2.1
BDNFP23560 AF186996.7-201ENST00000492781 209 ntBASIC1.95□□□□□ -2.1
BDNFP23560 RPS29P11-201ENST00000496507 171 ntBASIC1.95□□□□□ -2.1
BDNFP23560 ACA59.1-201ENST00000515966 143 ntBASIC1.95□□□□□ -2.1
BDNFP23560 RNU6-344P-201ENST00000516635 111 ntBASIC1.95□□□□□ -2.1
BDNFP23560 RNU6-548P-201ENST00000517083 115 ntBASIC1.95□□□□□ -2.1
BDNFP23560 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.95□□□□□ -2.1
BDNFP23560 AC084364.2-201ENST00000546924 395 ntBASIC1.95□□□□□ -2.1
BDNFP23560 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
BDNFP23560 AC245505.1-201ENST00000556398 224 ntBASIC1.95□□□□□ -2.1
BDNFP23560 AL078596.1-201ENST00000624856 447 ntBASIC1.95□□□□□ -2.1
BDNFP23560 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.95□□□□□ -2.1
BDNFP23560 RNU6-1305P-201ENST00000364353 104 ntBASIC1.94□□□□□ -2.1
BDNFP23560 SNORA63D-201ENST00000364359 132 ntBASIC1.94□□□□□ -2.1
BDNFP23560 AL590002.1-201ENST00000406554 418 ntBASIC1.94□□□□□ -2.1
BDNFP23560 AC008134.1-201ENST00000420943 193 ntBASIC1.94□□□□□ -2.1
BDNFP23560 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.94□□□□□ -2.1
BDNFP23560 MTCO3P8-201ENST00000453691 755 ntBASIC1.94□□□□□ -2.1
BDNFP23560 snoU13.30-201ENST00000458951 104 ntBASIC1.94□□□□□ -2.1
BDNFP23560 RPL23AP75-201ENST00000491601 451 ntBASIC1.94□□□□□ -2.1
BDNFP23560 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.94□□□□□ -2.1
BDNFP23560 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
BDNFP23560 RNU6-506P-201ENST00000516553 94 ntBASIC1.94□□□□□ -2.1
BDNFP23560 RNA5SP384-201ENST00000516615 116 ntBASIC1.94□□□□□ -2.1
BDNFP23560 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.94□□□□□ -2.1
BDNFP23560 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.94□□□□□ -2.1
BDNFP23560 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
BDNFP23560 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
BDNFP23560 MIR181A1-201ENST00000385026 110 ntBASIC1.93□□□□□ -2.1
BDNFP23560 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.93□□□□□ -2.1
BDNFP23560 RNU6-908P-201ENST00000410160 94 ntBASIC1.93□□□□□ -2.1
BDNFP23560 COX6CP10-201ENST00000416832 224 ntBASIC1.93□□□□□ -2.1
BDNFP23560 AC007098.1-201ENST00000420122 367 ntBASIC1.93□□□□□ -2.1
BDNFP23560 AC060773.1-201ENST00000421698 310 ntBASIC1.93□□□□□ -2.1
BDNFP23560 AC245047.4-201ENST00000433189 144 ntBASIC1.93□□□□□ -2.1
BDNFP23560 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.93□□□□□ -2.1
BDNFP23560 HMGN2P9-201ENST00000476875 229 ntBASIC1.93□□□□□ -2.1
BDNFP23560 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.93□□□□□ -2.1
BDNFP23560 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.93□□□□□ -2.1
BDNFP23560 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.93□□□□□ -2.1
BDNFP23560 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.93□□□□□ -2.1
BDNFP23560 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
BDNFP23560 MIR3976-201ENST00000606807 139 ntBASIC1.93□□□□□ -2.1
BDNFP23560 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.93□□□□□ -2.1
BDNFP23560 AC099654.12-201ENST00000639868 649 ntBASIC1.93□□□□□ -2.1
BDNFP23560 ICE2P2-201ENST00000483823 2787 ntBASIC1.93□□□□□ -2.1
BDNFP23560 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
BDNFP23560 snoU2-30.2-201ENST00000362805 70 ntBASIC1.92□□□□□ -2.1
BDNFP23560 RNY3P3-201ENST00000363816 102 ntBASIC1.92□□□□□ -2.1
BDNFP23560 SNORD115-32-201ENST00000364079 82 ntBASIC1.92□□□□□ -2.1
BDNFP23560 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
BDNFP23560 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.92□□□□□ -2.1
BDNFP23560 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.92□□□□□ -2.1
BDNFP23560 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.92□□□□□ -2.1
BDNFP23560 AC107393.1-201ENST00000512403 346 ntBASIC1.92□□□□□ -2.1
BDNFP23560 RNA5SP445-201ENST00000515889 115 ntBASIC1.92□□□□□ -2.1
BDNFP23560 Y_RNA.665-201ENST00000516177 98 ntBASIC1.92□□□□□ -2.1
BDNFP23560 RNU6-314P-201ENST00000516574 104 ntBASIC1.92□□□□□ -2.1
BDNFP23560 Y_RNA.704-201ENST00000516851 102 ntBASIC1.92□□□□□ -2.1
BDNFP23560 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
BDNFP23560 MIR4769-201ENST00000584126 77 ntBASIC1.92□□□□□ -2.1
BDNFP23560 SNORD11B-201ENST00000607707 90 ntBASIC1.92□□□□□ -2.1
BDNFP23560 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
BDNFP23560 MIR338-201ENST00000636369 67 ntBASIC1.92□□□□□ -2.1
BDNFP23560 AC068205.3-201ENST00000636385 468 ntBASIC1.92□□□□□ -2.1
BDNFP23560 AC100821.1-201ENST00000523153 2479 ntBASIC1.92□□□□□ -2.1
BDNFP23560 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms