| TFE3 | P19532 | RMST_8.1-201 | ENST00000610287 | 165 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SCARNA17.4-201 | ENST00000614296 | 143 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | SMAD5-AS1_2.1-201 | ENST00000617906 | 131 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | PWAR6-201 | ENST00000552334 | 4618 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | ZNF644-212 | ENST00000621077 | 2056 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AP003122.5-201 | ENST00000527668 | 3766 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | CHD9-213 | ENST00000564845 | 11504 nt | APPRIS P1 TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | EVI5-201 | ENST00000370331 | 7403 nt | APPRIS P3 TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC091152.2-201 | ENST00000591628 | 2569 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU1-101P-201 | ENST00000391171 | 127 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL357075.1-201 | ENST00000404107 | 726 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC010731.3-201 | ENST00000415029 | 566 nt | TSL 4 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC090952.1-201 | ENST00000424242 | 446 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | Y_RNA.637-201 | ENST00000459424 | 114 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC091021.1-201 | ENST00000468051 | 388 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RPS29P2-201 | ENST00000479278 | 136 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-1098P-201 | ENST00000516772 | 96 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | RNU6-1231P-201 | ENST00000517185 | 103 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AP001001.1-201 | ENST00000532422 | 826 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC012229.1-201 | ENST00000558699 | 499 nt | TSL 4 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC120045.1-201 | ENST00000563502 | 251 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC139426.2-201 | ENST00000568289 | 251 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC015911.6-201 | ENST00000588445 | 457 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AL133393.1-201 | ENST00000603277 | 287 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MIR92B-201 | ENST00000607575 | 96 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC107294.3-201 | ENST00000609211 | 526 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | U6.115-201 | ENST00000636045 | 103 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | U2.22-201 | ENST00000636441 | 106 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | HNRNPC-203 | ENST00000430246 | 4501 nt | APPRIS P2 TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | MAPK10-322 | ENST00000641485 | 4530 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | AC100800.1-201 | ENST00000524252 | 2054 nt | TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | TLR10-206 | ENST00000508334 | 2616 nt | APPRIS P1 TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | DAZ4-201 | ENST00000382296 | 2048 nt | APPRIS P5 TSL 5 BASIC | 3.53 | □□□□□ -1.84 | | |
| TFE3 | P19532 | LUZP2-208 | ENST00000620308 | 4981 nt | TSL 5 BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AP002088.1-201 | ENST00000382740 | 395 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU6-1027P-201 | ENST00000383998 | 107 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | Y_RNA.506-201 | ENST00000384494 | 102 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU6-763P-201 | ENST00000390865 | 106 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RN7SKP51-201 | ENST00000410781 | 304 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC114982.1-201 | ENST00000469402 | 321 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | HMGB3P3-201 | ENST00000510526 | 400 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | CFAP100-207 | ENST00000510833 | 481 nt | APPRIS ALT2 TSL 3 BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC008739.1-201 | ENST00000598137 | 575 nt | TSL 2 BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | TTC28-AS1_2.1-201 | ENST00000611117 | 157 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | OR51L1-203 | ENST00000641819 | 7300 nt | APPRIS P1 BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | BAZ2B-204 | ENST00000392783 | 8289 nt | APPRIS P1 TSL 5 BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | SCOC-201 | ENST00000338517 | 1864 nt | TSL 4 BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | DPP10-205 | ENST00000410059 | 6278 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.52 | □□□□□ -1.85 | | |
| TFE3 | P19532 | PPP2R5A-205 | ENST00000537030 | 1719 nt | TSL 2 BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | LRRTM2-201 | ENST00000274711 | 6017 nt | APPRIS P1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | ADGRL2-211 | ENST00000370730 | 6173 nt | TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | Y_RNA.7-201 | ENST00000362352 | 102 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU1-70P-201 | ENST00000362618 | 164 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNA5SP50-201 | ENST00000363731 | 107 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | Y_RNA.287-201 | ENST00000364853 | 94 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | SNORA51.4-201 | ENST00000364993 | 124 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU4-17P-201 | ENST00000365598 | 141 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AL020998.1-201 | ENST00000444923 | 229 nt | TSL 3 BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC097501.2-201 | ENST00000502668 | 305 nt | TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC083906.5-201 | ENST00000503722 | 328 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC010457.1-201 | ENST00000510469 | 458 nt | TSL 3 BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU6-1219P-201 | ENST00000516143 | 112 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | TUG1-202 | ENST00000521091 | 2110 nt | TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC107886.1-201 | ENST00000526935 | 516 nt | TSL 3 BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | MIR7157-201 | ENST00000635801 | 60 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | KIAA1109-203 | ENST00000388738 | 15574 nt | APPRIS P1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AL049781.1-201 | ENST00000623195 | 3585 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | SULT1B1-201 | ENST00000310613 | 7115 nt | APPRIS P1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AGL-206 | ENST00000370165 | 7106 nt | APPRIS P1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| TFE3 | P19532 | NCAM2-201 | ENST00000284894 | 4699 nt | APPRIS ALT2 TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU1-33P-201 | ENST00000364249 | 162 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU6-125P-201 | ENST00000384505 | 107 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | Y_RNA.571-201 | ENST00000384753 | 98 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | MIR1185-2-201 | ENST00000408687 | 86 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RN7SKP111-201 | ENST00000410349 | 271 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC126124.2-201 | ENST00000413542 | 321 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | MICF-203 | ENST00000432679 | 129 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | CYCSP35-201 | ENST00000451978 | 304 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU7-14P-201 | ENST00000459331 | 62 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | CFAP44-AS1-201 | ENST00000473329 | 396 nt | TSL 2 BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | HMGN2P9-201 | ENST00000476875 | 229 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | FCF1P8-201 | ENST00000510322 | 597 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RAC1P5-201 | ENST00000512182 | 576 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC068992.1-202 | ENST00000519280 | 270 nt | TSL 3 BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | MIR4753-201 | ENST00000585119 | 83 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | XIST_intron.1-201 | ENST00000619444 | 68 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC002064.3-201 | ENST00000623448 | 346 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RAPGEF6-202 | ENST00000308008 | 4176 nt | TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | AC010329.5-201 | ENST00000623497 | 2174 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | ZNF804B-202 | ENST00000611114 | 3968 nt | TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | SYNE1-212 | ENST00000423061 | 27436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| TFE3 | P19532 | SERPINI2-207 | ENST00000476257 | 1837 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | SEMA3D-201 | ENST00000284136 | 6265 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | Y_RNA.121-201 | ENST00000363309 | 113 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNU6-801P-201 | ENST00000364087 | 105 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | Y_RNA.361-201 | ENST00000365515 | 120 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | Y_RNA.368-201 | ENST00000365547 | 113 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | RNY1P5-201 | ENST00000383890 | 115 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | TRAV39-201 | ENST00000390466 | 331 nt | APPRIS P1 BASIC | 3.49 | □□□□□ -1.85 | | |
| TFE3 | P19532 | MIR1283-1-201 | ENST00000408494 | 87 nt | BASIC | 3.49 | □□□□□ -1.85 | | |