Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
VCLP18206 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VCLP18206 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
VCLP18206 MTND4P5-201ENST00000435821 1374 ntBASIC1.72□□□□□ -2.13
VCLP18206 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
VCLP18206 Y_RNA.414-201ENST00000384011 101 ntBASIC1.72□□□□□ -2.13
VCLP18206 RPL21P111-201ENST00000418453 477 ntBASIC1.72□□□□□ -2.13
VCLP18206 MTCO3P18-201ENST00000440206 761 ntBASIC1.72□□□□□ -2.13
VCLP18206 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.72□□□□□ -2.13
VCLP18206 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.72□□□□□ -2.13
VCLP18206 AC007215.1-201ENST00000464893 276 ntBASIC1.72□□□□□ -2.13
VCLP18206 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.72□□□□□ -2.13
VCLP18206 RPL23AP75-201ENST00000491601 451 ntBASIC1.72□□□□□ -2.13
VCLP18206 AF186996.7-201ENST00000492781 209 ntBASIC1.72□□□□□ -2.13
VCLP18206 RPS29P11-201ENST00000496507 171 ntBASIC1.72□□□□□ -2.13
VCLP18206 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.72□□□□□ -2.13
VCLP18206 AC067942.3-201ENST00000512025 362 ntBASIC1.72□□□□□ -2.13
VCLP18206 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.72□□□□□ -2.13
VCLP18206 RNU2-34P-201ENST00000516534 121 ntBASIC1.72□□□□□ -2.13
VCLP18206 DEFB131C-201ENST00000528817 165 ntBASIC1.72□□□□□ -2.13
VCLP18206 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.72□□□□□ -2.13
VCLP18206 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.72□□□□□ -2.13
VCLP18206 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.72□□□□□ -2.13
VCLP18206 MIR4524B-201ENST00000581569 115 ntBASIC1.72□□□□□ -2.13
VCLP18206 AC023043.2-201ENST00000589678 1026 ntBASIC1.72□□□□□ -2.13
VCLP18206 AL359757.2-201ENST00000624309 274 ntBASIC1.72□□□□□ -2.13
VCLP18206 AC022513.1-201ENST00000624512 117 ntBASIC1.72□□□□□ -2.13
VCLP18206 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.72□□□□□ -2.13
VCLP18206 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.72□□□□□ -2.13
VCLP18206 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
VCLP18206 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
VCLP18206 RNU6-418P-201ENST00000384035 107 ntBASIC1.71□□□□□ -2.14
VCLP18206 RNU6-95P-201ENST00000384697 107 ntBASIC1.71□□□□□ -2.14
VCLP18206 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
VCLP18206 MIR30A-201ENST00000385092 71 ntBASIC1.71□□□□□ -2.14
VCLP18206 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
VCLP18206 AC009161.1-201ENST00000417306 376 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.71□□□□□ -2.14
VCLP18206 Z82205.1-201ENST00000428456 297 ntBASIC1.71□□□□□ -2.14
VCLP18206 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.71□□□□□ -2.14
VCLP18206 DAP3P1-201ENST00000441522 278 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC009237.7-201ENST00000447357 229 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC074290.1-201ENST00000448883 135 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.71□□□□□ -2.14
VCLP18206 AC010409.1-201ENST00000487382 476 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC091435.1-201ENST00000505442 584 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
VCLP18206 ACA59.1-201ENST00000515966 143 ntBASIC1.71□□□□□ -2.14
VCLP18206 RNU6-948P-201ENST00000516374 107 ntBASIC1.71□□□□□ -2.14
VCLP18206 SNORA31.17-201ENST00000516953 127 ntBASIC1.71□□□□□ -2.14
VCLP18206 RNU6-250P-201ENST00000516958 103 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
VCLP18206 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.71□□□□□ -2.14
VCLP18206 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
VCLP18206 U4.5-201ENST00000617137 123 ntBASIC1.71□□□□□ -2.14
VCLP18206 AC009033.1-201ENST00000624279 431 ntBASIC1.71□□□□□ -2.14
VCLP18206 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
VCLP18206 Y_RNA.3-201ENST00000362331 103 ntBASIC1.7□□□□□ -2.14
VCLP18206 RNU6-661P-201ENST00000362409 107 ntBASIC1.7□□□□□ -2.14
VCLP18206 RNU4-12P-201ENST00000365233 139 ntBASIC1.7□□□□□ -2.14
VCLP18206 Y_RNA.554-201ENST00000384672 102 ntBASIC1.7□□□□□ -2.14
VCLP18206 EBAG9P1-201ENST00000418955 543 ntBASIC1.7□□□□□ -2.14
VCLP18206 MTCO3P8-201ENST00000453691 755 ntBASIC1.7□□□□□ -2.14
VCLP18206 MTND1P11-201ENST00000456661 876 ntBASIC1.7□□□□□ -2.14
VCLP18206 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.7□□□□□ -2.14
VCLP18206 RNU7-66P-201ENST00000459469 62 ntBASIC1.7□□□□□ -2.14
VCLP18206 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VCLP18206 MTCO2P30-201ENST00000503662 364 ntBASIC1.7□□□□□ -2.14
VCLP18206 HMGN1P13-201ENST00000505795 138 ntBASIC1.7□□□□□ -2.14
VCLP18206 RNU6-856P-201ENST00000516959 98 ntBASIC1.7□□□□□ -2.14
VCLP18206 MTND1P5-201ENST00000517906 940 ntBASIC1.7□□□□□ -2.14
VCLP18206 RRN3P3-201ENST00000549207 578 ntBASIC1.7□□□□□ -2.14
VCLP18206 AC015712.3-201ENST00000559380 164 ntBASIC1.7□□□□□ -2.14
VCLP18206 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.7□□□□□ -2.14
VCLP18206 MIR3672-201ENST00000584290 82 ntBASIC1.7□□□□□ -2.14
VCLP18206 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
VCLP18206 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.7□□□□□ -2.14
VCLP18206 AC019193.3-201ENST00000609144 554 ntBASIC1.7□□□□□ -2.14
VCLP18206 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VCLP18206 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.7□□□□□ -2.14
VCLP18206 BX322639.1-202ENST00000423987 2213 ntBASIC1.69□□□□□ -2.14
VCLP18206 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
VCLP18206 Y_RNA.450-201ENST00000384198 113 ntBASIC1.69□□□□□ -2.14
VCLP18206 MIR517A-201ENST00000385001 87 ntBASIC1.69□□□□□ -2.14
VCLP18206 AL590632.1-201ENST00000424289 371 ntBASIC1.69□□□□□ -2.14
VCLP18206 HSPE1P21-201ENST00000438283 308 ntBASIC1.69□□□□□ -2.14
VCLP18206 HMGB1P18-201ENST00000438801 619 ntBASIC1.69□□□□□ -2.14
VCLP18206 NFU1P2-201ENST00000448700 469 ntBASIC1.69□□□□□ -2.14
VCLP18206 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.69□□□□□ -2.14
VCLP18206 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.69□□□□□ -2.14
VCLP18206 RNU6-1198P-201ENST00000516904 67 ntBASIC1.69□□□□□ -2.14
VCLP18206 RNA5SP54-201ENST00000516951 92 ntBASIC1.69□□□□□ -2.14
VCLP18206 TPRKBP2-201ENST00000565969 475 ntBASIC1.69□□□□□ -2.14
VCLP18206 SCARNA4-201ENST00000629045 128 ntBASIC1.69□□□□□ -2.14
VCLP18206 RNU6-862P-201ENST00000362804 105 ntBASIC1.68□□□□□ -2.14
VCLP18206 SNORD50.1-201ENST00000362987 71 ntBASIC1.68□□□□□ -2.14
VCLP18206 Y_RNA.89-201ENST00000363031 102 ntBASIC1.68□□□□□ -2.14
VCLP18206 RNU4-9P-201ENST00000364951 139 ntBASIC1.68□□□□□ -2.14
VCLP18206 SNORD116-11-201ENST00000383882 92 ntBASIC1.68□□□□□ -2.14
VCLP18206 SNORD116-4-201ENST00000384733 96 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms