Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNA5SP322-201ENST00000363617 119 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 RNU6-407P-201ENST00000365280 104 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 Y_RNA.368-201ENST00000365547 113 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXD8P13378 Y_RNA.456-201ENST00000384232 111 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AL591034.1-201ENST00000407447 340 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AL714022.1-201ENST00000439897 151 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXD8P13378 RNU7-141P-201ENST00000459304 62 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AC091179.1-201ENST00000461606 579 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AC020914.4-201ENST00000597690 277 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXD8P13378 AL137843.1-201ENST00000605078 385 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AL391903.3-201ENST00000612158 163 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD8P13378 MIR6076-201ENST00000617521 113 ntBASIC3.9□□□□□ -1.79
HOXD8P13378 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXD8P13378 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXD8P13378 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXD8P13378 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD8P13378 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD8P13378 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD8P13378 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD8P13378 AL391516.1-201ENST00000554380 2449 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 RNU4-15P-201ENST00000362613 141 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 RNU6-655P-201ENST00000362858 107 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 Y_RNA.172-201ENST00000363765 102 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 Y_RNA.243-201ENST00000364481 109 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 RNU6-1325P-201ENST00000364905 105 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 RNU6-643P-201ENST00000384018 107 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 RNU1-89P-201ENST00000384592 164 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 MIR526A2-201ENST00000390198 65 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 RPL21P10-201ENST00000463521 490 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 SCARNA8-201ENST00000515924 131 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 HSPE1P7-201ENST00000604681 321 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 MIR7112-201ENST00000616126 65 ntBASIC3.89□□□□□ -1.79
HOXD8P13378 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD8P13378 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD8P13378 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD8P13378 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD8P13378 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD8P13378 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD8P13378 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD8P13378 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD8P13378 AC058791.1-201ENST00000608412 3198 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD8P13378 U3.8-201ENST00000363675 217 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 HMGN2P8-201ENST00000391458 268 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 YWHAEP4-201ENST00000505390 198 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXD8P13378 AL670379.2-201ENST00000604983 252 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD8P13378 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 MIR8057-201ENST00000620957 69 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 U6.115-201ENST00000636045 103 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 MIR6844-201ENST00000637122 62 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD8P13378 AC068700.1-201ENST00000565862 3754 ntBASIC3.88□□□□□ -1.79
HOXD8P13378 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD8P13378 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD8P13378 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD8P13378 snoU2_19.1-201ENST00000362361 80 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 RNU6-1210P-201ENST00000363775 107 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 RNU6-1305P-201ENST00000364353 104 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 RNU6-728P-201ENST00000365375 104 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 MIR128-1-201ENST00000384921 82 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 MT-TT-201ENST00000387460 66 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 MIR1289-1-201ENST00000408836 144 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 RNA5SP504-201ENST00000410676 117 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 AC023141.4-201ENST00000412031 328 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 AC245291.1-201ENST00000419501 328 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD8P13378 AP002884.2-201ENST00000471647 395 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD8P13378 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXD8P13378 AP000867.2-201ENST00000532468 320 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 LARP7P3-201ENST00000579888 337 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 AC012493.2-201ENST00000595083 291 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD8P13378 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.87□□□□□ -1.79
HOXD8P13378 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HOXD8P13378 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HOXD8P13378 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HOXD8P13378 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD8P13378 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD8P13378 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HOXD8P13378 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXD8P13378 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD8P13378 AC010889.1-201ENST00000566193 2666 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HOXD8P13378 RNU1-75P-201ENST00000347264 129 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 Y_RNA.229-201ENST00000364347 113 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 AL606845.1-201ENST00000404881 255 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 RNU2-52P-201ENST00000410680 190 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXD8P13378 RPL23AP58-201ENST00000440453 469 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 snoU13.14-201ENST00000459372 104 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 AC112771.1-201ENST00000463581 102 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms