Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC135776.4-201ENST00000624300 1904 ntBASIC3.24□□□□□ -1.89
COL6A2P12110 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.24□□□□□ -1.89
COL6A2P12110 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL6A2P12110 RNU6-1264P-201ENST00000383891 107 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 RNU2-54P-201ENST00000410299 190 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 RNA5SP475-201ENST00000410568 110 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 AC004866.1-201ENST00000411748 78 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.23□□□□□ -1.89
COL6A2P12110 AC009414.1-201ENST00000427200 443 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 AC027124.2-201ENST00000428249 105 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 Z98742.2-201ENST00000431564 187 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.23□□□□□ -1.89
COL6A2P12110 AC004386.2-201ENST00000441858 148 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 AC009237.7-201ENST00000447357 229 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 MRPS10P1-201ENST00000448483 130 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 RNU6-966P-201ENST00000516479 104 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 SNORA31.26-201ENST00000517250 137 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.23□□□□□ -1.89
COL6A2P12110 AC007179.3-201ENST00000604976 235 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 AC011921.3-201ENST00000605540 361 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 SNORD11B-201ENST00000607707 90 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 AC091932.3-201ENST00000624223 323 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 AC068205.3-201ENST00000636385 468 ntBASIC3.23□□□□□ -1.89
COL6A2P12110 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.23□□□□□ -1.89
COL6A2P12110 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL6A2P12110 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
COL6A2P12110 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL6A2P12110 MIR411-201ENST00000362239 96 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 RNU6-727P-201ENST00000363592 107 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 RNA5SP72-201ENST00000364442 117 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 Y_RNA.292-201ENST00000364904 97 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 RNU2-61P-201ENST00000411069 191 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 Y_RNA.626-201ENST00000411288 95 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 AC009963.1-201ENST00000417265 157 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 RPL23AP3-201ENST00000453844 468 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.22□□□□□ -1.89
COL6A2P12110 DEFB131C-201ENST00000528817 165 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 AP002001.1-203ENST00000534002 267 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.22□□□□□ -1.89
COL6A2P12110 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.22□□□□□ -1.89
COL6A2P12110 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
COL6A2P12110 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.22□□□□□ -1.89
COL6A2P12110 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
COL6A2P12110 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.22□□□□□ -1.89
COL6A2P12110 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.89
COL6A2P12110 AC091564.4-201ENST00000533934 2194 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 Y_RNA.415-201ENST00000384012 112 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 SNORA67.2-201ENST00000384300 149 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 SUMO1P3-201ENST00000439961 304 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.21□□□□□ -1.9
COL6A2P12110 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.21□□□□□ -1.9
COL6A2P12110 SNORD2.1-201ENST00000458762 69 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.21□□□□□ -1.9
COL6A2P12110 RNU2-44P-201ENST00000516795 194 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.21□□□□□ -1.9
COL6A2P12110 RPL21P9-201ENST00000556149 474 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.21□□□□□ -1.9
COL6A2P12110 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.21□□□□□ -1.9
COL6A2P12110 MIR5006-201ENST00000583027 110 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 AC011471.1-201ENST00000585766 187 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 Z83818.1-201ENST00000603584 150 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.21□□□□□ -1.9
COL6A2P12110 AC110079.1-202ENST00000635213 138 ntBASIC3.21□□□□□ -1.9
COL6A2P12110 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL6A2P12110 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.21□□□□□ -1.9
COL6A2P12110 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL6A2P12110 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL6A2P12110 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
COL6A2P12110 snoU2_19.1-201ENST00000362361 80 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 Y_RNA.217-201ENST00000364214 105 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 SNORD32B-201ENST00000364460 84 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 SNORA18.2-201ENST00000383865 132 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 RNU6-1083P-201ENST00000384022 107 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 MIR218-2-201ENST00000385006 110 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 Y_RNA.590-201ENST00000410140 107 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 RNA5SP504-201ENST00000410676 117 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 RNU6-651P-201ENST00000411040 105 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 Y_RNA.793-201ENST00000411222 111 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 NDUFB4P10-201ENST00000452541 359 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 RNU7-120P-201ENST00000459334 63 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 Y_RNA.638-201ENST00000459374 113 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 Y_RNA.641-201ENST00000459414 105 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.2□□□□□ -1.9
COL6A2P12110 RNA5SP112-201ENST00000515937 99 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 SNORA74D-201ENST00000516404 141 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 RNU2-12P-201ENST00000517216 168 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 SCARNA11.3-201ENST00000517276 130 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.2□□□□□ -1.9
COL6A2P12110 MIR4765-201ENST00000585007 77 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 AL512605.2-201ENST00000592972 256 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL6A2P12110 AC093831.2-201ENST00000624393 3427 ntBASIC3.2□□□□□ -1.9
COL6A2P12110 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms