Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL359697.1-201ENST00000624879 587 ntBASIC1.04□□□□□ -2.24
CD28P10747 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CD28P10747 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CD28P10747 AC010615.1-201ENST00000594254 1764 ntBASIC1.03□□□□□ -2.24
CD28P10747 AL161722.3-201ENST00000605789 2983 ntBASIC1.03□□□□□ -2.24
CD28P10747 BX322639.1-202ENST00000423987 2213 ntBASIC1.03□□□□□ -2.24
CD28P10747 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CD28P10747 RNU6-862P-201ENST00000362804 105 ntBASIC1.03□□□□□ -2.24
CD28P10747 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
CD28P10747 SNRPEP10-201ENST00000420249 274 ntBASIC1.03□□□□□ -2.24
CD28P10747 AC060773.1-201ENST00000421698 310 ntBASIC1.03□□□□□ -2.24
CD28P10747 CST2P1-201ENST00000425770 87 ntBASIC1.03□□□□□ -2.24
CD28P10747 FTH1P12-201ENST00000432137 551 ntBASIC1.03□□□□□ -2.24
CD28P10747 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.03□□□□□ -2.24
CD28P10747 HSPE1P9-201ENST00000440046 311 ntBASIC1.03□□□□□ -2.24
CD28P10747 AC098826.2-201ENST00000452011 651 ntBASIC1.03□□□□□ -2.24
CD28P10747 snoU13.6-201ENST00000458785 104 ntBASIC1.03□□□□□ -2.24
CD28P10747 AC004223.1-201ENST00000479840 271 ntBASIC1.03□□□□□ -2.24
CD28P10747 MTCYBP18-201ENST00000501056 747 ntBASIC1.03□□□□□ -2.24
CD28P10747 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.03□□□□□ -2.24
CD28P10747 RNA5SP445-201ENST00000515889 115 ntBASIC1.03□□□□□ -2.24
CD28P10747 Y_RNA.688-201ENST00000516565 95 ntBASIC1.03□□□□□ -2.24
CD28P10747 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.03□□□□□ -2.24
CD28P10747 AP003033.1-201ENST00000527244 415 ntBASIC1.03□□□□□ -2.24
CD28P10747 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.03□□□□□ -2.24
CD28P10747 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.03□□□□□ -2.24
CD28P10747 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.03□□□□□ -2.24
CD28P10747 AC084364.2-201ENST00000546924 395 ntBASIC1.03□□□□□ -2.24
CD28P10747 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.03□□□□□ -2.24
CD28P10747 AC016727.2-201ENST00000603988 621 ntBASIC1.03□□□□□ -2.24
CD28P10747 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.03□□□□□ -2.24
CD28P10747 AC092807.2-201ENST00000609367 243 ntBASIC1.03□□□□□ -2.24
CD28P10747 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.03□□□□□ -2.24
CD28P10747 AC068792.1-201ENST00000621354 417 ntBASIC1.03□□□□□ -2.24
CD28P10747 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CD28P10747 MTND5P26-201ENST00000426018 1752 ntBASIC1.03□□□□□ -2.24
CD28P10747 MTND5P10-201ENST00000603719 1809 ntBASIC1.03□□□□□ -2.25
CD28P10747 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
CD28P10747 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CD28P10747 RNU6-545P-201ENST00000362681 104 ntBASIC1.02□□□□□ -2.25
CD28P10747 Y_RNA.132-201ENST00000363421 102 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNU6-414P-201ENST00000363705 104 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNU6-522P-201ENST00000364497 107 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNU6-1317P-201ENST00000364582 104 ntBASIC1.02□□□□□ -2.25
CD28P10747 SNORA69-201ENST00000383895 132 ntBASIC1.02□□□□□ -2.25
CD28P10747 SNORD116-9-201ENST00000384000 95 ntBASIC1.02□□□□□ -2.25
CD28P10747 SNORD116-3-201ENST00000384287 95 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNU6-784P-201ENST00000384330 106 ntBASIC1.02□□□□□ -2.25
CD28P10747 SNORD116-7-201ENST00000384404 95 ntBASIC1.02□□□□□ -2.25
CD28P10747 SNORD116-5-201ENST00000384462 95 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.02□□□□□ -2.25
CD28P10747 EIF4E2P1-201ENST00000393781 255 ntBASIC1.02□□□□□ -2.25
CD28P10747 MIR1267-201ENST00000408723 78 ntBASIC1.02□□□□□ -2.25
CD28P10747 AC004866.1-201ENST00000411748 78 ntBASIC1.02□□□□□ -2.25
CD28P10747 SDAD1P3-201ENST00000427380 333 ntBASIC1.02□□□□□ -2.25
CD28P10747 TIMM9P3-201ENST00000428659 274 ntBASIC1.02□□□□□ -2.25
CD28P10747 MTND3P9-201ENST00000429526 346 ntBASIC1.02□□□□□ -2.25
CD28P10747 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.02□□□□□ -2.25
CD28P10747 AC009237.7-201ENST00000447357 229 ntBASIC1.02□□□□□ -2.25
CD28P10747 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.02□□□□□ -2.25
CD28P10747 AC011406.1-201ENST00000512440 370 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNA5SP401-201ENST00000515920 127 ntBASIC1.02□□□□□ -2.25
CD28P10747 SNORA19.2-201ENST00000516013 114 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNA5SP61-201ENST00000516453 100 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNA5SP481-201ENST00000516814 122 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
CD28P10747 RNU6-902P-201ENST00000517212 91 ntBASIC1.02□□□□□ -2.25
CD28P10747 AC026407.1-201ENST00000518369 204 ntBASIC1.02□□□□□ -2.25
CD28P10747 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.02□□□□□ -2.25
CD28P10747 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.02□□□□□ -2.25
CD28P10747 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.02□□□□□ -2.25
CD28P10747 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.02□□□□□ -2.25
CD28P10747 AC025423.5-201ENST00000550230 219 ntBASIC1.02□□□□□ -2.25
CD28P10747 MTND3P12-201ENST00000559068 328 ntBASIC1.02□□□□□ -2.25
CD28P10747 AC027514.1-201ENST00000588561 1603 ntBASIC1.02□□□□□ -2.25
CD28P10747 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
CD28P10747 TCL6_2.1-201ENST00000615162 119 ntBASIC1.02□□□□□ -2.25
CD28P10747 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.02□□□□□ -2.25
CD28P10747 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CD28P10747 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CD28P10747 Y_RNA.67-201ENST00000362870 100 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU6-271P-201ENST00000363858 105 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU1-96P-201ENST00000364163 162 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU4-66P-201ENST00000365199 138 ntBASIC1.01□□□□□ -2.25
CD28P10747 SNORD26-201ENST00000384147 75 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU6-975P-201ENST00000384296 105 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU6-1235P-201ENST00000384559 107 ntBASIC1.01□□□□□ -2.25
CD28P10747 MIR194-1-201ENST00000384892 85 ntBASIC1.01□□□□□ -2.25
CD28P10747 SNORA40.6-201ENST00000391153 128 ntBASIC1.01□□□□□ -2.25
CD28P10747 EBAG9P1-201ENST00000418955 543 ntBASIC1.01□□□□□ -2.25
CD28P10747 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.01□□□□□ -2.25
CD28P10747 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.01□□□□□ -2.25
CD28P10747 AC069257.2-201ENST00000441819 155 ntBASIC1.01□□□□□ -2.25
CD28P10747 OR2AQ1P-201ENST00000451972 200 ntBASIC1.01□□□□□ -2.25
CD28P10747 MTND3P16-201ENST00000452205 344 ntBASIC1.01□□□□□ -2.25
CD28P10747 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.01□□□□□ -2.25
CD28P10747 RPS29P23-201ENST00000458635 123 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU6-498P-201ENST00000459468 107 ntBASIC1.01□□□□□ -2.25
CD28P10747 RPS26P55-201ENST00000471178 356 ntBASIC1.01□□□□□ -2.25
CD28P10747 RPL36AP21-201ENST00000490372 323 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms