Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APPP05067 RNU6-655P-201ENST00000362858 107 ntBASIC3.37□□□□□ -1.87
APPP05067 Y_RNA.276-201ENST00000364732 109 ntBASIC3.37□□□□□ -1.87
APPP05067 Y_RNA.439-201ENST00000384119 94 ntBASIC3.37□□□□□ -1.87
APPP05067 SNORD78.2-201ENST00000391076 69 ntBASIC3.37□□□□□ -1.87
APPP05067 Y_RNA.602-201ENST00000410535 92 ntBASIC3.37□□□□□ -1.87
APPP05067 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.37□□□□□ -1.87
APPP05067 AC097463.2-201ENST00000421074 142 ntBASIC3.37□□□□□ -1.87
APPP05067 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.37□□□□□ -1.87
APPP05067 AC090515.1-201ENST00000465295 476 ntBASIC3.37□□□□□ -1.87
APPP05067 AL049873.1-201ENST00000480540 376 ntBASIC3.37□□□□□ -1.87
APPP05067 AP004217.1-201ENST00000480579 346 ntBASIC3.37□□□□□ -1.87
APPP05067 MIR449C-201ENST00000516047 92 ntBASIC3.37□□□□□ -1.87
APPP05067 AC115990.1-201ENST00000526957 301 ntBASIC3.37□□□□□ -1.87
APPP05067 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.37□□□□□ -1.87
APPP05067 MIR376A1-201ENST00000616574 68 ntBASIC3.37□□□□□ -1.87
APPP05067 AC092593.1-201ENST00000515413 1815 ntBASIC3.37□□□□□ -1.87
APPP05067 AC135776.4-201ENST00000624300 1904 ntBASIC3.36□□□□□ -1.87
APPP05067 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
APPP05067 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
APPP05067 RNU6-1159P-201ENST00000362933 107 ntBASIC3.36□□□□□ -1.87
APPP05067 Y_RNA.84-201ENST00000363011 104 ntBASIC3.36□□□□□ -1.87
APPP05067 Y_RNA.286-201ENST00000364813 102 ntBASIC3.36□□□□□ -1.87
APPP05067 RNU6-1145P-201ENST00000384246 107 ntBASIC3.36□□□□□ -1.87
APPP05067 MIR181A2-201ENST00000384863 110 ntBASIC3.36□□□□□ -1.87
APPP05067 SNORA46.1-201ENST00000391069 153 ntBASIC3.36□□□□□ -1.87
APPP05067 RNU4-30P-201ENST00000410245 143 ntBASIC3.36□□□□□ -1.87
APPP05067 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.36□□□□□ -1.87
APPP05067 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.36□□□□□ -1.87
APPP05067 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.36□□□□□ -1.87
APPP05067 AC073901.1-201ENST00000462471 408 ntBASIC3.36□□□□□ -1.87
APPP05067 AC091179.3-201ENST00000474761 144 ntBASIC3.36□□□□□ -1.87
APPP05067 AC025465.3-201ENST00000510570 311 ntBASIC3.36□□□□□ -1.87
APPP05067 AC091826.1-201ENST00000514065 313 ntBASIC3.36□□□□□ -1.87
APPP05067 MIR3923-201ENST00000579521 83 ntBASIC3.36□□□□□ -1.87
APPP05067 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.36□□□□□ -1.87
APPP05067 MIR3136-201ENST00000583498 78 ntBASIC3.36□□□□□ -1.87
APPP05067 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.36□□□□□ -1.87
APPP05067 RPL12P50-201ENST00000603116 116 ntBASIC3.36□□□□□ -1.87
APPP05067 AC010900.2-201ENST00000604508 210 ntBASIC3.36□□□□□ -1.87
APPP05067 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.36□□□□□ -1.87
APPP05067 FO624990.1-201ENST00000636373 85 ntBASIC3.36□□□□□ -1.87
APPP05067 AL359854.1-201ENST00000614203 1594 ntBASIC3.36□□□□□ -1.87
APPP05067 AC010615.1-201ENST00000594254 1764 ntBASIC3.35□□□□□ -1.87
APPP05067 AC026241.1-201ENST00000517873 2142 ntBASIC3.35□□□□□ -1.87
APPP05067 RNU6-1210P-201ENST00000363775 107 ntBASIC3.35□□□□□ -1.87
APPP05067 SNORD115-8-201ENST00000363856 82 ntBASIC3.35□□□□□ -1.87
APPP05067 SNORD115-38-201ENST00000365037 82 ntBASIC3.35□□□□□ -1.87
APPP05067 Y_RNA.401-201ENST00000383965 117 ntBASIC3.35□□□□□ -1.87
APPP05067 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.35□□□□□ -1.87
APPP05067 AC027124.2-201ENST00000428249 105 ntBASIC3.35□□□□□ -1.87
APPP05067 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.35□□□□□ -1.87
APPP05067 RPL23AP3-201ENST00000453844 468 ntBASIC3.35□□□□□ -1.87
APPP05067 RNU6-408P-201ENST00000515910 100 ntBASIC3.35□□□□□ -1.87
APPP05067 RPPH1-2P-201ENST00000516688 293 ntBASIC3.35□□□□□ -1.87
APPP05067 RNU6-1271P-201ENST00000517049 105 ntBASIC3.35□□□□□ -1.87
APPP05067 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.35□□□□□ -1.87
APPP05067 GTF3AP2-201ENST00000557014 266 ntBASIC3.35□□□□□ -1.87
APPP05067 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.35□□□□□ -1.87
APPP05067 ZNF861P-201ENST00000588126 639 ntBASIC3.35□□□□□ -1.87
APPP05067 RPL30P11-203ENST00000598995 310 ntBASIC3.35□□□□□ -1.87
APPP05067 AC090115.4-201ENST00000609970 188 ntBASIC3.35□□□□□ -1.87
APPP05067 AC062037.2-201ENST00000610137 73 ntBASIC3.35□□□□□ -1.87
APPP05067 uc_338.14-201ENST00000613162 166 ntBASIC3.35□□□□□ -1.87
APPP05067 AP001282.2-201ENST00000616149 309 ntBASIC3.35□□□□□ -1.87
APPP05067 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.35□□□□□ -1.87
APPP05067 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APPP05067 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APPP05067 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
APPP05067 SNORA5B-201ENST00000363786 132 ntBASIC3.34□□□□□ -1.87
APPP05067 RNU6-1180P-201ENST00000364935 107 ntBASIC3.34□□□□□ -1.87
APPP05067 SNORA18.2-201ENST00000383865 132 ntBASIC3.34□□□□□ -1.87
APPP05067 SNORD115-46-201ENST00000390982 71 ntBASIC3.34□□□□□ -1.87
APPP05067 RPS26P42-201ENST00000413485 326 ntBASIC3.34□□□□□ -1.87
APPP05067 AC112220.1-201ENST00000434628 355 ntBASIC3.34□□□□□ -1.87
APPP05067 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.34□□□□□ -1.87
APPP05067 SNORD127-201ENST00000458892 86 ntBASIC3.34□□□□□ -1.87
APPP05067 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.34□□□□□ -1.87
APPP05067 SNORA40.9-201ENST00000515895 93 ntBASIC3.34□□□□□ -1.87
APPP05067 RN7SKP132-201ENST00000516001 208 ntBASIC3.34□□□□□ -1.87
APPP05067 RNU6-567P-201ENST00000516746 107 ntBASIC3.34□□□□□ -1.87
APPP05067 Y_RNA.713-201ENST00000517013 96 ntBASIC3.34□□□□□ -1.87
APPP05067 HSPE1P18-201ENST00000517602 280 ntBASIC3.34□□□□□ -1.87
APPP05067 AP002001.1-203ENST00000534002 267 ntBASIC3.34□□□□□ -1.87
APPP05067 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APPP05067 ELOCP29-201ENST00000588193 334 ntBASIC3.34□□□□□ -1.87
APPP05067 AC010620.2-201ENST00000600135 313 ntBASIC3.34□□□□□ -1.87
APPP05067 AC010297.1-201ENST00000623948 149 ntBASIC3.34□□□□□ -1.87
APPP05067 AC090517.3-201ENST00000625170 141 ntBASIC3.34□□□□□ -1.87
APPP05067 SCARNA15.3-201ENST00000626315 122 ntBASIC3.34□□□□□ -1.87
APPP05067 SCARNA4.1-201ENST00000628597 123 ntBASIC3.34□□□□□ -1.87
APPP05067 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
APPP05067 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.33□□□□□ -1.88
APPP05067 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
APPP05067 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APPP05067 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APPP05067 RNA5SP393-201ENST00000363423 117 ntBASIC3.33□□□□□ -1.88
APPP05067 Y_RNA.541-201ENST00000384640 113 ntBASIC3.33□□□□□ -1.88
APPP05067 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
APPP05067 MIR1302-6-201ENST00000408466 90 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms