Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.22□□□□□ -2.21
HLA-DPB1P04440 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.22□□□□□ -2.21
HLA-DPB1P04440 SEPT14P4-201ENST00000513445 186 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 RNA5SP437-201ENST00000517249 129 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 FO082796.1-201ENST00000523795 183 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DPB1P04440 HMGB1P33-201ENST00000563485 527 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.22□□□□□ -2.21
HLA-DPB1P04440 MIR3198-2-201ENST00000577868 80 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC100830.2-201ENST00000581636 240 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC146944.4-201ENST00000602697 718 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 MIR3976-201ENST00000606807 139 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AF250324.2-201ENST00000608299 610 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 AC005562.2-201ENST00000618264 111 ntBASIC1.22□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.38-201ENST00000362617 102 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 RNU6-254P-201ENST00000363377 107 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 Y_RNA.194-201ENST00000363985 102 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 MIR30A-201ENST00000385092 71 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 MIR548B-201ENST00000385247 97 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 MIR934-201ENST00000401241 83 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AL033519.2-201ENST00000403958 392 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AL117342.1-201ENST00000404861 406 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 RNU4-62P-201ENST00000410125 130 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 ARL5AP1-201ENST00000418991 388 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC060773.1-201ENST00000421698 310 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AL590632.1-201ENST00000424289 371 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC016717.1-201ENST00000448918 286 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 ATP5J2P3-201ENST00000451550 258 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 MTCO3P8-201ENST00000453691 755 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC027575.1-201ENST00000481064 460 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 MTCO1P29-201ENST00000496868 288 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 RNU6-1041P-201ENST00000516254 102 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 RNU6-856P-201ENST00000516959 98 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 FGF7P1-201ENST00000582820 288 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 RPL17P51-201ENST00000605218 238 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 AC004492.1-201ENST00000607036 742 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
HLA-DPB1P04440 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
HLA-DPB1P04440 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HLA-DPB1P04440 RNU6-451P-201ENST00000362921 107 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 RNU6-1090P-201ENST00000364065 94 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 Y_RNA.373-201ENST00000365600 103 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 MIR1283-1-201ENST00000408494 87 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 RPS26P42-201ENST00000413485 326 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AC108667.1-201ENST00000428618 249 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DPB1P04440 HMGN2P26-201ENST00000463169 339 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AC087477.1-201ENST00000465747 340 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 HMGN2P9-201ENST00000476875 229 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DPB1P04440 RNU6-970P-201ENST00000516312 107 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AC024909.2-201ENST00000553035 286 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 MIR5006-201ENST00000583027 110 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AL162413.1-201ENST00000603198 110 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AL133215.3-201ENST00000609801 448 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 MIR8076-201ENST00000611401 83 ntBASIC1.2□□□□□ -2.22
HLA-DPB1P04440 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.2□□□□□ -2.22
HLA-DPB1P04440 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DPB1P04440 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 Y_RNA.132-201ENST00000363421 102 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 Y_RNA.151-201ENST00000363566 112 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 RNU4-24P-201ENST00000364565 139 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 Y_RNA.256-201ENST00000364594 104 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 RNU6-784P-201ENST00000384330 106 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 Y_RNA.517-201ENST00000384551 106 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC016907.1-201ENST00000419483 435 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 SNRPEP10-201ENST00000420249 274 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 MTND1P1-201ENST00000445453 368 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 MTCO2P7-201ENST00000446518 666 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 RNU7-66P-201ENST00000459469 62 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 RNA5SP384-201ENST00000516615 116 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 RRN3P3-201ENST00000549207 578 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC026371.1-201ENST00000551867 419 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 ZNF519P2-201ENST00000557032 169 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 MIR4769-201ENST00000584126 77 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms