Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 C8orf59P1-201ENST00000429930 303 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 ATP5J2P3-201ENST00000451550 258 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 OR2AQ1P-201ENST00000451972 200 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 snoU13.30-201ENST00000458951 104 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 HMGN2P26-201ENST00000463169 339 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AC087477.1-201ENST00000465747 340 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AC027575.1-201ENST00000481064 460 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 RNA5SP384-201ENST00000516615 116 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 MTND1P35-201ENST00000526739 508 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 RRN3P3-201ENST00000549207 578 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AL158827.2-201ENST00000602494 330 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 TCL6_2.1-201ENST00000615162 119 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AL691447.3-201ENST00000635020 330 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AC024614.3-201ENST00000637860 256 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 WWP1P1-201ENST00000466609 2769 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.13□□□□□ -2.23
HLA-DQA1P01909 RNU6-933P-201ENST00000384424 107 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 RNU6-95P-201ENST00000384697 107 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 MIR504-201ENST00000385065 83 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AL117342.1-201ENST00000404861 406 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 MIR1289-2-201ENST00000408360 111 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DQA1P01909 RPS26P42-201ENST00000413485 326 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.13□□□□□ -2.23
HLA-DQA1P01909 Z82205.1-201ENST00000428456 297 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AL589823.1-201ENST00000429577 183 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 RNU7-66P-201ENST00000459469 62 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC007215.1-201ENST00000464893 276 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 HMGN2P9-201ENST00000476875 229 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC067942.3-201ENST00000512025 362 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DQA1P01909 RNU6-548P-201ENST00000517083 115 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC016957.1-201ENST00000534895 309 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DQA1P01909 MIR3945-201ENST00000581853 98 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 MIR3672-201ENST00000584290 82 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 MIR8074-201ENST00000615081 81 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC126177.8-201ENST00000618339 1015 ntBASIC1.13□□□□□ -2.23
HLA-DQA1P01909 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DQA1P01909 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 RNU6-661P-201ENST00000362409 107 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 RNU1-96P-201ENST00000364163 162 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 RNU6-338P-201ENST00000383888 105 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 RNU6-128P-201ENST00000383976 107 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 RNU6-790P-201ENST00000384479 105 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 Y_RNA.554-201ENST00000384672 102 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AL627390.1-201ENST00000396055 340 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 MIR300-201ENST00000401138 83 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 MIR1304-201ENST00000408243 91 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 HSPE1P9-201ENST00000440046 311 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 MTCO3P18-201ENST00000440206 761 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC010095.1-201ENST00000443543 144 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC011406.1-201ENST00000512440 370 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 RNU6-856P-201ENST00000516959 98 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 RNA5SP437-201ENST00000517249 129 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC084364.2-201ENST00000546924 395 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC008269.2-201ENST00000561915 1105 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 MIR4753-201ENST00000585119 83 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 BX248123.2-201ENST00000606318 124 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AL138726.1-201ENST00000614873 333 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC015540.1-201ENST00000615828 501 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 BX322639.1-202ENST00000423987 2213 ntBASIC1.12□□□□□ -2.23
HLA-DQA1P01909 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.12□□□□□ -2.23
HLA-DQA1P01909 AC010615.1-201ENST00000594254 1764 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HLA-DQA1P01909 U8.10-201ENST00000384260 133 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 MIR548B-201ENST00000385247 97 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 U8.13-201ENST00000390842 128 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 MTCO1P21-201ENST00000416634 589 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DQA1P01909 Z82188.1-201ENST00000436709 154 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AL353572.1-201ENST00000442490 417 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 NFU1P2-201ENST00000448700 469 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AC079354.2-201ENST00000453523 154 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DQA1P01909 PCMTD1P1-201ENST00000455560 355 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 RPS29P23-201ENST00000458635 123 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 snoU13.15-201ENST00000459407 104 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 FAM206BP-201ENST00000510179 541 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 RNU6-256P-201ENST00000516747 97 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 SNORA44.1-201ENST00000517031 108 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DQA1P01909 MIR3198-2-201ENST00000577868 80 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms