Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR643-201ENST00000385267 97 ntBASIC-0.34□□□□□ -2.46
TNFP01375 RNA5SP467-201ENST00000391274 118 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AL136310.1-201ENST00000404926 654 ntBASIC-0.34□□□□□ -2.46
TNFP01375 RNU2-42P-201ENST00000410697 113 ntBASIC-0.34□□□□□ -2.46
TNFP01375 SNORD83.1-201ENST00000411362 77 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AL158050.1-201ENST00000416077 457 ntBASIC-0.34□□□□□ -2.46
TNFP01375 MTATP6P16-201ENST00000434543 526 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.34□□□□□ -2.46
TNFP01375 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.34□□□□□ -2.46
TNFP01375 STAG3L5P-204ENST00000443759 179 ntBASIC-0.34□□□□□ -2.46
TNFP01375 RPS29P8-201ENST00000445109 171 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AC016717.1-201ENST00000448918 286 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AC119751.4-201ENST00000507498 357 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AC025465.4-201ENST00000513422 638 ntBASIC-0.34□□□□□ -2.46
TNFP01375 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.34□□□□□ -2.46
TNFP01375 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.34□□□□□ -2.46
TNFP01375 MIR4789-201ENST00000577469 82 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AC234772.3-201ENST00000602277 528 ntBASIC-0.34□□□□□ -2.46
TNFP01375 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.34□□□□□ -2.46
TNFP01375 AC124016.2-201ENST00000610058 665 ntBASIC-0.34□□□□□ -2.46
TNFP01375 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.34□□□□□ -2.46
TNFP01375 MTND4P4-201ENST00000439033 1366 ntBASIC-0.34□□□□□ -2.46
TNFP01375 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.35□□□□□ -2.47
TNFP01375 SNORA75.6-201ENST00000391318 127 ntBASIC-0.35□□□□□ -2.47
TNFP01375 RN7SKP142-201ENST00000411236 328 ntBASIC-0.35□□□□□ -2.47
TNFP01375 MED13P1-201ENST00000428342 171 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.35□□□□□ -2.47
TNFP01375 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.35□□□□□ -2.47
TNFP01375 HSFY7P-201ENST00000432672 318 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.35□□□□□ -2.47
TNFP01375 HSFY8P-201ENST00000437934 318 ntBASIC-0.35□□□□□ -2.47
TNFP01375 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.35□□□□□ -2.47
TNFP01375 AL139824.2-201ENST00000458731 1095 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.35□□□□□ -2.47
TNFP01375 AC109445.1-201ENST00000512356 383 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.35□□□□□ -2.47
TNFP01375 AC024995.1-201ENST00000523014 93 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC009712.1-201ENST00000564938 316 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC005176.2-201ENST00000596933 147 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC064807.4-201ENST00000607201 407 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC122133.1-201ENST00000613964 233 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC007014.2-201ENST00000615581 479 ntBASIC-0.35□□□□□ -2.47
TNFP01375 MIR6079-201ENST00000635807 62 ntBASIC-0.35□□□□□ -2.47
TNFP01375 AC006927.4-201ENST00000639187 543 ntBASIC-0.35□□□□□ -2.47
TNFP01375 RNY4P16-201ENST00000364768 94 ntBASIC-0.36□□□□□ -2.47
TNFP01375 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.36□□□□□ -2.47
TNFP01375 RNU6-440P-201ENST00000390882 105 ntBASIC-0.36□□□□□ -2.47
TNFP01375 SNORD71-201ENST00000411292 86 ntBASIC-0.36□□□□□ -2.47
TNFP01375 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.36□□□□□ -2.47
TNFP01375 MRPS10P2-201ENST00000431226 381 ntBASIC-0.36□□□□□ -2.47
TNFP01375 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.36□□□□□ -2.47
TNFP01375 SNORD4A-201ENST00000459174 72 ntBASIC-0.36□□□□□ -2.47
TNFP01375 AC010469.2-201ENST00000496412 480 ntBASIC-0.36□□□□□ -2.47
TNFP01375 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
TNFP01375 MIR4436A-201ENST00000585278 85 ntBASIC-0.36□□□□□ -2.47
TNFP01375 AC008752.3-201ENST00000588113 712 ntBASIC-0.36□□□□□ -2.47
TNFP01375 MTND3P19-201ENST00000603825 345 ntBASIC-0.36□□□□□ -2.47
TNFP01375 BCRP9-201ENST00000605312 388 ntBASIC-0.36□□□□□ -2.47
TNFP01375 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.36□□□□□ -2.47
TNFP01375 RN7SL660P-201ENST00000614852 299 ntBASIC-0.36□□□□□ -2.47
TNFP01375 MIR548AZ-201ENST00000616567 95 ntBASIC-0.36□□□□□ -2.47
TNFP01375 AC231657.1-201ENST00000624313 397 ntBASIC-0.36□□□□□ -2.47
TNFP01375 RNU6-545P-201ENST00000362681 104 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RNU6-78P-201ENST00000362897 107 ntBASIC-0.37□□□□□ -2.47
TNFP01375 SNORA36.1-201ENST00000363424 132 ntBASIC-0.37□□□□□ -2.47
TNFP01375 U6.112-201ENST00000384129 70 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RNU6-417P-201ENST00000384712 107 ntBASIC-0.37□□□□□ -2.47
TNFP01375 SNORA32.3-201ENST00000384772 121 ntBASIC-0.37□□□□□ -2.47
TNFP01375 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
TNFP01375 RNU6-278P-201ENST00000390945 109 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RPS20P2-201ENST00000402520 389 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.37□□□□□ -2.47
TNFP01375 AC016909.1-201ENST00000415916 166 ntBASIC-0.37□□□□□ -2.47
TNFP01375 AL139396.1-201ENST00000421137 167 ntBASIC-0.37□□□□□ -2.47
TNFP01375 HMGN2P22-201ENST00000427588 175 ntBASIC-0.37□□□□□ -2.47
TNFP01375 MTND4P15-201ENST00000437913 1033 ntBASIC-0.37□□□□□ -2.47
TNFP01375 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.37□□□□□ -2.47
TNFP01375 ELOCP24-201ENST00000456370 334 ntBASIC-0.37□□□□□ -2.47
TNFP01375 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.37□□□□□ -2.47
TNFP01375 TPT1P7-201ENST00000458300 517 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RNU7-165P-201ENST00000458864 60 ntBASIC-0.37□□□□□ -2.47
TNFP01375 SNORD126-201ENST00000459475 77 ntBASIC-0.37□□□□□ -2.47
TNFP01375 SNORD111.1-201ENST00000516421 86 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RNU6-677P-201ENST00000516914 101 ntBASIC-0.37□□□□□ -2.47
TNFP01375 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.37□□□□□ -2.47
TNFP01375 LRRC6P1-201ENST00000532188 885 ntBASIC-0.37□□□□□ -2.47
TNFP01375 MIR3612-201ENST00000579753 87 ntBASIC-0.37□□□□□ -2.47
TNFP01375 AP002360.4-201ENST00000606980 481 ntBASIC-0.37□□□□□ -2.47
TNFP01375 AL391099.1-201ENST00000624635 187 ntBASIC-0.37□□□□□ -2.47
TNFP01375 RNU6-853P-201ENST00000364306 107 ntBASIC-0.38□□□□□ -2.47
TNFP01375 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
TNFP01375 SNORA8.3-201ENST00000384679 139 ntBASIC-0.38□□□□□ -2.47
TNFP01375 MIR644A-201ENST00000385262 94 ntBASIC-0.38□□□□□ -2.47
TNFP01375 SNORA26-201ENST00000391286 122 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AL022718.1-201ENST00000412004 84 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AL356583.2-201ENST00000426536 280 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC005002.2-201ENST00000438228 269 ntBASIC-0.38□□□□□ -2.47
TNFP01375 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC243964.1-201ENST00000441814 261 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms