Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC068781.1-201ENST00000488231 618 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.06□□□□□ -2.08
CLDN1O95832 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.06□□□□□ -2.08
CLDN1O95832 SNORA25.11-201ENST00000515935 105 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 RNU6-120P-201ENST00000516077 103 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN1O95832 SNRPGP18-201ENST00000553000 214 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 AC007375.1-201ENST00000554513 578 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 AC020661.2-201ENST00000560114 134 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 MIR3199-1-201ENST00000582434 88 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLDN1O95832 AC069294.1-201ENST00000608397 350 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 RMST_6.1-201ENST00000611980 203 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 AC016717.2-201ENST00000609089 5141 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN1O95832 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLDN1O95832 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLDN1O95832 MIR369-201ENST00000362155 70 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 U3.13-201ENST00000364804 214 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 RNU6-474P-201ENST00000384243 107 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 MIR95-201ENST00000385072 81 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLDN1O95832 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 RNU6-220P-201ENST00000390919 107 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 MIR1302-11-201ENST00000408051 138 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 MIR548P-201ENST00000408336 84 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 MIR1302-9-201ENST00000408365 138 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 MIR1302-10-201ENST00000408734 138 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.05□□□□□ -2.08
CLDN1O95832 MTCYBP10-201ENST00000424905 650 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 OR2AQ1P-201ENST00000451972 200 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 snoU13.30-201ENST00000458951 104 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN1O95832 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN1O95832 AC004584.2-201ENST00000570407 410 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 RPL30P11-203ENST00000598995 310 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 MIR1302-2-201ENST00000607096 138 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN1O95832 AC137590.2-201ENST00000619709 240 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLDN1O95832 MTND4P27-201ENST00000450813 1354 ntBASIC2.05□□□□□ -2.08
CLDN1O95832 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN1O95832 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN1O95832 RNU6-874P-201ENST00000362390 105 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 Y_RNA.128-201ENST00000363391 112 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 RNU6-137P-201ENST00000363680 108 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 RNU1-115P-201ENST00000365329 160 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN1O95832 RNA5SP494-201ENST00000410653 129 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 CYCSP49-201ENST00000420810 319 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 PMCHL1-202ENST00000423102 261 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 MRPS18CP6-201ENST00000423587 223 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 MTCO3P29-201ENST00000432119 779 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 AC099799.1-201ENST00000439809 192 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN1O95832 AC245517.4-201ENST00000448601 281 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 Y_RNA.631-201ENST00000459607 101 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 RPL36AP21-201ENST00000490372 323 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 AC023141.11-201ENST00000508864 202 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 HMGB3P3-201ENST00000510526 400 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 RNU6-1153P-201ENST00000516760 105 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 Y_RNA.711-201ENST00000516993 102 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 RNU6-699P-201ENST00000517081 110 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN1O95832 AC100812.1-201ENST00000607622 580 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 AC092881.1-201ENST00000638218 2733 ntBASIC2.04□□□□□ -2.08
CLDN1O95832 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN1O95832 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN1O95832 SNORA38-201ENST00000363946 132 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 RNU4-56P-201ENST00000364700 142 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 RNU6-99P-201ENST00000364721 107 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 Y_RNA.405-201ENST00000383979 100 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 Y_RNA.451-201ENST00000384200 100 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 Y_RNA.466-201ENST00000384294 113 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 Y_RNA.524-201ENST00000384564 100 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 Y_RNA.561-201ENST00000384694 100 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 MIR29B2-201ENST00000385055 81 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 RPL23AP50-201ENST00000434149 455 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 AL035666.1-201ENST00000446195 348 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 snoU13.6-201ENST00000458785 104 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 AC007215.1-201ENST00000464893 276 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 RNU6-264P-201ENST00000517134 104 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 RNA5SP402-201ENST00000517148 110 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 AC018630.3-201ENST00000542637 96 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 AC027288.2-201ENST00000553028 243 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN1O95832 AC023824.2-201ENST00000566185 400 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 MIR3923-201ENST00000579521 83 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN1O95832 AL137847.3-201ENST00000611521 109 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 PCGEM1.1-201ENST00000613431 131 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 AC087588.2-201ENST00000617667 426 ntBASIC2.03□□□□□ -2.08
CLDN1O95832 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN1O95832 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.02□□□□□ -2.09
CLDN1O95832 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN1O95832 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLDN1O95832 SNORD32B-201ENST00000364460 84 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 Y_RNA.445-201ENST00000384168 102 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms