Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 7SK.7-201ENST00000603504 247 ntBASIC2.31□□□□□ -2.04
DDX58O95786 AC009994.1-201ENST00000606889 253 ntBASIC2.31□□□□□ -2.04
DDX58O95786 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.31□□□□□ -2.04
DDX58O95786 AL353997.5-201ENST00000618886 171 ntBASIC2.31□□□□□ -2.04
DDX58O95786 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
DDX58O95786 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
DDX58O95786 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
DDX58O95786 RNU6-845P-201ENST00000362578 103 ntBASIC2.3□□□□□ -2.04
DDX58O95786 SNORA18.2-201ENST00000383865 132 ntBASIC2.3□□□□□ -2.04
DDX58O95786 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX58O95786 RPS3AP52-201ENST00000435639 297 ntBASIC2.3□□□□□ -2.04
DDX58O95786 RNA5SP57-201ENST00000459463 123 ntBASIC2.3□□□□□ -2.04
DDX58O95786 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX58O95786 RNU6-1098P-201ENST00000516772 96 ntBASIC2.3□□□□□ -2.04
DDX58O95786 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX58O95786 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX58O95786 AC243960.4-201ENST00000600532 288 ntBASIC2.3□□□□□ -2.04
DDX58O95786 AC137590.2-201ENST00000619709 240 ntBASIC2.3□□□□□ -2.04
DDX58O95786 SDR42E1P4-201ENST00000620894 481 ntBASIC2.3□□□□□ -2.04
DDX58O95786 AC084768.2-201ENST00000622736 221 ntBASIC2.3□□□□□ -2.04
DDX58O95786 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.3□□□□□ -2.04
DDX58O95786 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX58O95786 RNU6-1059P-201ENST00000363752 98 ntBASIC2.29□□□□□ -2.04
DDX58O95786 RNU6-1164P-201ENST00000364428 107 ntBASIC2.29□□□□□ -2.04
DDX58O95786 SNORA16.1-201ENST00000364597 132 ntBASIC2.29□□□□□ -2.04
DDX58O95786 RNA5SP138-201ENST00000365098 114 ntBASIC2.29□□□□□ -2.04
DDX58O95786 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX58O95786 MIR597-201ENST00000384968 97 ntBASIC2.29□□□□□ -2.04
DDX58O95786 FGF7P8-201ENST00000402994 292 ntBASIC2.29□□□□□ -2.04
DDX58O95786 EIF4EP2-201ENST00000422816 654 ntBASIC2.29□□□□□ -2.04
DDX58O95786 AC096920.1-201ENST00000423991 241 ntBASIC2.29□□□□□ -2.04
DDX58O95786 SNRPEP8-201ENST00000442866 260 ntBASIC2.29□□□□□ -2.04
DDX58O95786 RPL23AP6-201ENST00000446637 472 ntBASIC2.29□□□□□ -2.04
DDX58O95786 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.29□□□□□ -2.04
DDX58O95786 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX58O95786 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
DDX58O95786 RPS29P11-201ENST00000496507 171 ntBASIC2.29□□□□□ -2.04
DDX58O95786 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX58O95786 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX58O95786 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.29□□□□□ -2.04
DDX58O95786 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
DDX58O95786 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX58O95786 AC009487.4-201ENST00000624969 3585 ntBASIC2.28□□□□□ -2.04
DDX58O95786 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.28□□□□□ -2.04
DDX58O95786 Y_RNA.132-201ENST00000363421 102 ntBASIC2.28□□□□□ -2.04
DDX58O95786 Y_RNA.279-201ENST00000364763 95 ntBASIC2.28□□□□□ -2.04
DDX58O95786 MIR549A-201ENST00000385268 96 ntBASIC2.28□□□□□ -2.04
DDX58O95786 MIR548K-201ENST00000408406 116 ntBASIC2.28□□□□□ -2.04
DDX58O95786 MIR320B2-201ENST00000408479 138 ntBASIC2.28□□□□□ -2.04
DDX58O95786 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
DDX58O95786 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
DDX58O95786 RPL37P10-201ENST00000412884 288 ntBASIC2.28□□□□□ -2.04
DDX58O95786 AC123900.1-201ENST00000420390 96 ntBASIC2.28□□□□□ -2.04
DDX58O95786 OR2AQ1P-201ENST00000451972 200 ntBASIC2.28□□□□□ -2.04
DDX58O95786 AC079354.2-201ENST00000453523 154 ntBASIC2.28□□□□□ -2.04
DDX58O95786 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.28□□□□□ -2.04
DDX58O95786 AC099654.14-201ENST00000638599 341 ntBASIC2.28□□□□□ -2.04
DDX58O95786 RNU4-9P-201ENST00000364951 139 ntBASIC2.27□□□□□ -2.05
DDX58O95786 Y_RNA.473-201ENST00000384333 102 ntBASIC2.27□□□□□ -2.05
DDX58O95786 MIR32-201ENST00000384965 70 ntBASIC2.27□□□□□ -2.05
DDX58O95786 RBMX2P4-201ENST00000441256 376 ntBASIC2.27□□□□□ -2.05
DDX58O95786 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.27□□□□□ -2.05
DDX58O95786 AC103851.1-201ENST00000506833 274 ntBASIC2.27□□□□□ -2.05
DDX58O95786 RNU2-44P-201ENST00000516795 194 ntBASIC2.27□□□□□ -2.05
DDX58O95786 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX58O95786 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX58O95786 AC016727.2-201ENST00000603988 621 ntBASIC2.27□□□□□ -2.05
DDX58O95786 AC005034.5-201ENST00000604219 466 ntBASIC2.27□□□□□ -2.05
DDX58O95786 RBM11P1-201ENST00000604951 799 ntBASIC2.27□□□□□ -2.05
DDX58O95786 uc_338.5-201ENST00000611839 155 ntBASIC2.27□□□□□ -2.05
DDX58O95786 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.27□□□□□ -2.05
DDX58O95786 LINC02555-201ENST00000563933 1951 ntBASIC2.27□□□□□ -2.05
DDX58O95786 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
DDX58O95786 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
DDX58O95786 Y_RNA.2-201ENST00000362330 96 ntBASIC2.26□□□□□ -2.05
DDX58O95786 Y_RNA.48-201ENST00000362710 103 ntBASIC2.26□□□□□ -2.05
DDX58O95786 Y_RNA.332-201ENST00000365271 113 ntBASIC2.26□□□□□ -2.05
DDX58O95786 MIR1283-2-201ENST00000408621 87 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AL158823.1-201ENST00000418441 478 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AL358453.1-201ENST00000422522 250 ntBASIC2.26□□□□□ -2.05
DDX58O95786 Z82188.1-201ENST00000436709 154 ntBASIC2.26□□□□□ -2.05
DDX58O95786 HMGB1P18-201ENST00000438801 619 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AL353689.1-201ENST00000438895 199 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AL035666.1-201ENST00000446195 348 ntBASIC2.26□□□□□ -2.05
DDX58O95786 ATP5EP1-201ENST00000510257 156 ntBASIC2.26□□□□□ -2.05
DDX58O95786 SNORA25.15-201ENST00000516487 89 ntBASIC2.26□□□□□ -2.05
DDX58O95786 RNU6-250P-201ENST00000516958 103 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.26□□□□□ -2.05
DDX58O95786 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.26□□□□□ -2.05
DDX58O95786 MIR5006-201ENST00000583027 110 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.26□□□□□ -2.05
DDX58O95786 AC005562.2-201ENST00000618264 111 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.26□□□□□ -2.05
DDX58O95786 SCARNA4-201ENST00000629045 128 ntBASIC2.26□□□□□ -2.05
DDX58O95786 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
DDX58O95786 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
DDX58O95786 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
DDX58O95786 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.25□□□□□ -2.05
DDX58O95786 SNORD31B-201ENST00000364977 69 ntBASIC2.25□□□□□ -2.05
DDX58O95786 RNU6-601P-201ENST00000384540 107 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms