Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC091021.1-201ENST00000468051 388 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 RNU6-848P-201ENST00000515948 107 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 RNU6-617P-201ENST00000516147 107 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 RNU6-473P-201ENST00000516164 107 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
POLR1AO95602 AK6P2-201ENST00000549020 471 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.71□□□□□ -2.52
POLR1AO95602 AC021231.3-201ENST00000558497 370 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 PART1_2.1-201ENST00000612397 250 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.71□□□□□ -2.52
POLR1AO95602 SNORD31B-201ENST00000364977 69 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 RNU6-284P-201ENST00000411105 106 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.72□□□□□ -2.52
POLR1AO95602 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.72□□□□□ -2.52
POLR1AO95602 MTCO2P7-201ENST00000446518 666 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.72□□□□□ -2.52
POLR1AO95602 RPL39P36-201ENST00000490784 156 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 AC104629.1-201ENST00000494226 508 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.72□□□□□ -2.52
POLR1AO95602 RNU6-567P-201ENST00000516746 107 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 RNU6-782P-201ENST00000516852 104 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.72□□□□□ -2.52
POLR1AO95602 OR8K2P-201ENST00000524645 927 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.72□□□□□ -2.52
POLR1AO95602 AL359697.1-201ENST00000624879 587 ntBASIC-0.72□□□□□ -2.52
POLR1AO95602 RNA5SP205-201ENST00000364653 136 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 RNU6-269P-201ENST00000391077 97 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.72□□□□□ -2.53
POLR1AO95602 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.72□□□□□ -2.53
POLR1AO95602 MTND1P17-201ENST00000448961 204 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AC114755.3-201ENST00000481111 251 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 SNORA31.3-201ENST00000516029 96 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AP001328.1-201ENST00000528550 176 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AC013828.2-201ENST00000532487 235 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.72□□□□□ -2.53
POLR1AO95602 AL606834.3-201ENST00000602615 496 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AL390123.1-201ENST00000603216 237 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 SNORA25.18-201ENST00000607153 114 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 MIR3666-201ENST00000607845 111 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 MIR8054-201ENST00000620877 86 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AC024940.5-201ENST00000622889 474 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 AC099654.9-201ENST00000637055 678 ntBASIC-0.72□□□□□ -2.53
POLR1AO95602 RNU6-252P-201ENST00000363232 107 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 SNORD32B-201ENST00000364460 84 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 RNU6-891P-201ENST00000384280 111 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 RNU6-440P-201ENST00000390882 105 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 AC016831.2-201ENST00000417179 352 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 RNU7-14P-201ENST00000459331 62 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 AC091860.1-201ENST00000505723 432 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 AC024995.1-201ENST00000523014 93 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.73□□□□□ -2.53
POLR1AO95602 MIR4637-201ENST00000582405 84 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 AC234772.3-201ENST00000602277 528 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 MIR6755-201ENST00000619993 66 ntBASIC-0.73□□□□□ -2.53
POLR1AO95602 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.74□□□□□ -2.53
POLR1AO95602 ZNF886P-201ENST00000450781 723 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.74□□□□□ -2.53
POLR1AO95602 AL122001.1-201ENST00000457027 370 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 AC010531.2-201ENST00000465012 153 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 RNU6-885P-201ENST00000516607 104 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 RNU2-46P-201ENST00000517038 113 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 MIR5697-201ENST00000578045 78 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 MIR3192-201ENST00000584920 77 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 AL670379.3-201ENST00000605040 251 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.74□□□□□ -2.53
POLR1AO95602 MTND4P4-201ENST00000439033 1366 ntBASIC-0.74□□□□□ -2.53
POLR1AO95602 MIR660-201ENST00000385235 97 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 RNA5SP467-201ENST00000391274 118 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 AL353997.1-201ENST00000432936 108 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 RPS23P5-201ENST00000495419 428 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 TMEM251P1-201ENST00000503717 318 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.75□□□□□ -2.53
POLR1AO95602 MIR3612-201ENST00000579753 87 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 AL136363.2-201ENST00000604173 851 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 RNU4-84P-201ENST00000364200 139 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 RNU6-932P-201ENST00000391108 106 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.75□□□□□ -2.53
POLR1AO95602 MTND3P5-201ENST00000512798 333 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 AL359075.3-201ENST00000613288 217 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 AL450472.1-202ENST00000637286 180 ntBASIC-0.75□□□□□ -2.53
POLR1AO95602 RNU6-142P-201ENST00000384019 107 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 SNORD41-201ENST00000386967 70 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 MTCO2P31-201ENST00000402702 684 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 MIR1185-1-201ENST00000408598 86 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 AL365338.1-201ENST00000422282 858 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 BX119904.4-201ENST00000424402 301 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 MTCO3P43-201ENST00000440974 771 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.76□□□□□ -2.53
POLR1AO95602 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 RNU1-142P-201ENST00000516682 145 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
POLR1AO95602 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.76□□□□□ -2.53
POLR1AO95602 AP003716.2-201ENST00000528260 108 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.76□□□□□ -2.53
POLR1AO95602 SNORA59B-202ENST00000578183 701 ntBASIC-0.76□□□□□ -2.53
POLR1AO95602 uc_338.28-201ENST00000612082 187 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms