Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC092354.1-201ENST00000606057 376 ntBASIC0.77□□□□□ -2.29
VAPBO95292 U2.17-201ENST00000611454 95 ntBASIC0.77□□□□□ -2.29
VAPBO95292 AC068792.1-201ENST00000621354 417 ntBASIC0.77□□□□□ -2.29
VAPBO95292 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.77□□□□□ -2.29
VAPBO95292 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VAPBO95292 RNU4-79P-201ENST00000362764 141 ntBASIC0.76□□□□□ -2.29
VAPBO95292 RNU6-1031P-201ENST00000384773 107 ntBASIC0.76□□□□□ -2.29
VAPBO95292 RNU6-584P-201ENST00000410350 95 ntBASIC0.76□□□□□ -2.29
VAPBO95292 MTND3P17-201ENST00000416968 344 ntBASIC0.76□□□□□ -2.29
VAPBO95292 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.76□□□□□ -2.29
VAPBO95292 AC010154.1-201ENST00000425857 269 ntBASIC0.76□□□□□ -2.29
VAPBO95292 RAB28P5-201ENST00000427490 651 ntBASIC0.76□□□□□ -2.29
VAPBO95292 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.76□□□□□ -2.29
VAPBO95292 MTCO2P3-201ENST00000442543 421 ntBASIC0.76□□□□□ -2.29
VAPBO95292 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.76□□□□□ -2.29
VAPBO95292 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.76□□□□□ -2.29
VAPBO95292 MTND3P3-201ENST00000505004 126 ntBASIC0.76□□□□□ -2.29
VAPBO95292 RNU1-142P-201ENST00000516682 145 ntBASIC0.76□□□□□ -2.29
VAPBO95292 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.76□□□□□ -2.29
VAPBO95292 AC025423.5-201ENST00000550230 219 ntBASIC0.76□□□□□ -2.29
VAPBO95292 MTCO3P23-201ENST00000561363 289 ntBASIC0.76□□□□□ -2.29
VAPBO95292 AC245014.2-201ENST00000603689 287 ntBASIC0.76□□□□□ -2.29
VAPBO95292 AC246785.4-201ENST00000605374 287 ntBASIC0.76□□□□□ -2.29
VAPBO95292 AP001506.1-201ENST00000615444 211 ntBASIC0.76□□□□□ -2.29
VAPBO95292 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
VAPBO95292 RNU6-1305P-201ENST00000364353 104 ntBASIC0.75□□□□□ -2.29
VAPBO95292 Y_RNA.399-201ENST00000383955 105 ntBASIC0.75□□□□□ -2.29
VAPBO95292 RNU6-456P-201ENST00000384493 107 ntBASIC0.75□□□□□ -2.29
VAPBO95292 SNORD12-201ENST00000391002 90 ntBASIC0.75□□□□□ -2.29
VAPBO95292 CDK8P2-201ENST00000415020 547 ntBASIC0.75□□□□□ -2.29
VAPBO95292 PIGFP2-201ENST00000421400 651 ntBASIC0.75□□□□□ -2.29
VAPBO95292 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.75□□□□□ -2.29
VAPBO95292 AC009961.2-201ENST00000435771 251 ntBASIC0.75□□□□□ -2.29
VAPBO95292 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.75□□□□□ -2.29
VAPBO95292 AC009237.7-201ENST00000447357 229 ntBASIC0.75□□□□□ -2.29
VAPBO95292 AL033528.1-201ENST00000453780 140 ntBASIC0.75□□□□□ -2.29
VAPBO95292 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.75□□□□□ -2.29
VAPBO95292 RNU7-167P-201ENST00000459160 62 ntBASIC0.75□□□□□ -2.29
VAPBO95292 PDCD5P2-201ENST00000507570 312 ntBASIC0.75□□□□□ -2.29
VAPBO95292 AC008015.1-201ENST00000555505 465 ntBASIC0.75□□□□□ -2.29
VAPBO95292 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.75□□□□□ -2.29
VAPBO95292 AL513534.2-201ENST00000603836 250 ntBASIC0.75□□□□□ -2.29
VAPBO95292 AC016727.2-201ENST00000603988 621 ntBASIC0.75□□□□□ -2.29
VAPBO95292 AP000907.4-201ENST00000604143 237 ntBASIC0.75□□□□□ -2.29
VAPBO95292 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
VAPBO95292 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.75□□□□□ -2.29
VAPBO95292 RNA5SP467-201ENST00000391274 118 ntBASIC0.74□□□□□ -2.29
VAPBO95292 RNU2-29P-201ENST00000410423 189 ntBASIC0.74□□□□□ -2.29
VAPBO95292 RNU6-57P-201ENST00000411348 103 ntBASIC0.74□□□□□ -2.29
VAPBO95292 MTCO2P34-201ENST00000421994 607 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.74□□□□□ -2.29
VAPBO95292 AL606517.2-201ENST00000442855 241 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.74□□□□□ -2.29
VAPBO95292 SNRPFP3-201ENST00000457792 225 ntBASIC0.74□□□□□ -2.29
VAPBO95292 SRRM1P2-201ENST00000464531 1192 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AC092991.1-201ENST00000477176 376 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AC005178.1-201ENST00000508392 440 ntBASIC0.74□□□□□ -2.29
VAPBO95292 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AC105417.1-201ENST00000514691 285 ntBASIC0.74□□□□□ -2.29
VAPBO95292 RNU6-1069P-201ENST00000516612 133 ntBASIC0.74□□□□□ -2.29
VAPBO95292 RNU6-922P-201ENST00000516753 99 ntBASIC0.74□□□□□ -2.29
VAPBO95292 MIR4781-201ENST00000585250 76 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AC097065.2-201ENST00000608159 533 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AL359075.3-201ENST00000613288 217 ntBASIC0.74□□□□□ -2.29
VAPBO95292 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.74□□□□□ -2.29
VAPBO95292 AC018630.2-201ENST00000534866 2403 ntBASIC0.73□□□□□ -2.29
VAPBO95292 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
VAPBO95292 Y_RNA.287-201ENST00000364853 94 ntBASIC0.73□□□□□ -2.29
VAPBO95292 SNORA40.3-201ENST00000390964 122 ntBASIC0.73□□□□□ -2.29
VAPBO95292 MIR320B2-201ENST00000408479 138 ntBASIC0.73□□□□□ -2.29
VAPBO95292 RNA5SP494-201ENST00000410653 129 ntBASIC0.73□□□□□ -2.29
VAPBO95292 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.73□□□□□ -2.29
VAPBO95292 AC008134.1-201ENST00000420943 193 ntBASIC0.73□□□□□ -2.29
VAPBO95292 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.73□□□□□ -2.29
VAPBO95292 MTND2P39-201ENST00000457230 764 ntBASIC0.73□□□□□ -2.29
VAPBO95292 TRBVA-201ENST00000498804 316 ntBASIC0.73□□□□□ -2.29
VAPBO95292 AC010493.1-201ENST00000513479 292 ntBASIC0.73□□□□□ -2.29
VAPBO95292 RNU6-612P-201ENST00000516909 102 ntBASIC0.73□□□□□ -2.29
VAPBO95292 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
VAPBO95292 AC108706.1-201ENST00000611053 297 ntBASIC0.73□□□□□ -2.29
VAPBO95292 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.73□□□□□ -2.29
VAPBO95292 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.72□□□□□ -2.29
VAPBO95292 MTND4P5-201ENST00000435821 1374 ntBASIC0.72□□□□□ -2.29
VAPBO95292 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
VAPBO95292 Y_RNA.4-201ENST00000362333 112 ntBASIC0.72□□□□□ -2.29
VAPBO95292 RNU6-227P-201ENST00000362865 103 ntBASIC0.72□□□□□ -2.29
VAPBO95292 Y_RNA.560-201ENST00000384689 102 ntBASIC0.72□□□□□ -2.29
VAPBO95292 MIR200A-201ENST00000384875 90 ntBASIC0.72□□□□□ -2.29
VAPBO95292 MIR586-201ENST00000385035 97 ntBASIC0.72□□□□□ -2.29
VAPBO95292 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
VAPBO95292 RPS26P42-201ENST00000413485 326 ntBASIC0.72□□□□□ -2.29
VAPBO95292 TIMM9P3-201ENST00000428659 274 ntBASIC0.72□□□□□ -2.29
VAPBO95292 RPS4XP11-201ENST00000446897 772 ntBASIC0.72□□□□□ -2.29
VAPBO95292 RNU7-57P-201ENST00000459540 60 ntBASIC0.72□□□□□ -2.29
VAPBO95292 RNU6-1037P-201ENST00000459571 107 ntBASIC0.72□□□□□ -2.29
VAPBO95292 AC048334.1-201ENST00000477975 159 ntBASIC0.72□□□□□ -2.29
VAPBO95292 AC105758.1-201ENST00000506038 399 ntBASIC0.72□□□□□ -2.29
VAPBO95292 SNORA31.10-201ENST00000516482 106 ntBASIC0.72□□□□□ -2.29
VAPBO95292 RNA5SP168-201ENST00000516642 112 ntBASIC0.72□□□□□ -2.29
VAPBO95292 RN7SKP49-201ENST00000516675 260 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms