Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RPL37P10-201ENST00000412884 288 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.9□□□□□ -2.27
UPK1BO75841 CYCSP49-201ENST00000420810 319 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 AL353193.1-201ENST00000421444 268 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 TIMM9P3-201ENST00000428659 274 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK1BO75841 USP9YP29-201ENST00000445112 563 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 AC009237.7-201ENST00000447357 229 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 snoU13.15-201ENST00000459407 104 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 MTCO3P38-201ENST00000468910 766 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK1BO75841 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.9□□□□□ -2.27
UPK1BO75841 AC010493.1-201ENST00000513479 292 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 RNU6-189P-201ENST00000516120 101 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
UPK1BO75841 AP000873.5-201ENST00000533906 236 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK1BO75841 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.9□□□□□ -2.27
UPK1BO75841 AC109347.2-201ENST00000610220 349 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 AC021506.2-201ENST00000612354 169 ntBASIC0.9□□□□□ -2.27
UPK1BO75841 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
UPK1BO75841 AL663109.1-201ENST00000411498 844 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 MTCO2P19-201ENST00000427513 598 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AL606489.2-201ENST00000433886 234 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.89□□□□□ -2.27
UPK1BO75841 PGBD4P5-201ENST00000445958 426 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 MTCO2P18-201ENST00000457151 658 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.89□□□□□ -2.27
UPK1BO75841 SNORA59A-201ENST00000459326 152 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 RNU7-57P-201ENST00000459540 60 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AF186996.7-201ENST00000492781 209 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 RNU6-1146P-201ENST00000516282 102 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 LRRC34P1-201ENST00000542742 915 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.89□□□□□ -2.27
UPK1BO75841 AL118558.2-201ENST00000556294 238 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 MIR4760-201ENST00000585040 80 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AC092747.3-201ENST00000603769 301 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AL357078.3-201ENST00000607528 618 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AL121757.2-201ENST00000611223 313 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.89□□□□□ -2.27
UPK1BO75841 AC139792.3-201ENST00000623525 224 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 AC005609.4-201ENST00000625071 447 ntBASIC0.89□□□□□ -2.27
UPK1BO75841 RNU6-1123P-201ENST00000362347 106 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 RNU6-1329P-201ENST00000365664 107 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 MIR450B-201ENST00000401182 78 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 RPS26P42-201ENST00000413485 326 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 AC016909.1-201ENST00000415916 166 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 AC073464.1-201ENST00000429823 534 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK1BO75841 RPS27P1-201ENST00000450552 247 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 U8.21-201ENST00000459536 136 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK1BO75841 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.88□□□□□ -2.27
UPK1BO75841 SNORA31.10-201ENST00000516482 106 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 RNU1-117P-201ENST00000517041 158 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 AC087854.1-201ENST00000519706 414 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK1BO75841 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK1BO75841 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK1BO75841 AC087683.1-201ENST00000591187 441 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 BX284668.6-201ENST00000606899 438 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 AC068792.1-201ENST00000621354 417 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 AL359697.1-201ENST00000624879 587 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 OR5AK4P-201ENST00000635912 903 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
UPK1BO75841 ZNF209P-201ENST00000593450 2304 ntBASIC0.88□□□□□ -2.27
UPK1BO75841 RNU5A-6P-201ENST00000384136 116 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 MIR515-2-201ENST00000384883 83 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 MIR515-1-201ENST00000384884 83 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 MIR586-201ENST00000385035 97 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 SNORD37.1-201ENST00000390968 65 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.87□□□□□ -2.27
UPK1BO75841 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.87□□□□□ -2.27
UPK1BO75841 AC005002.2-201ENST00000438228 269 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK1BO75841 AL513124.1-201ENST00000450410 614 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 HSPE1P13-201ENST00000451143 297 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 SNORD13-201ENST00000459299 104 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 AC103851.1-201ENST00000506833 274 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 RNU6-165P-201ENST00000517170 99 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
UPK1BO75841 SCOCP1-201ENST00000554676 349 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK1BO75841 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.87□□□□□ -2.27
UPK1BO75841 AL022345.2-201ENST00000606307 135 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 AC073114.1-201ENST00000612027 490 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 SCARNA4-201ENST00000629045 128 ntBASIC0.87□□□□□ -2.27
UPK1BO75841 AC018630.2-201ENST00000534866 2403 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 Y_RNA.378-201ENST00000365652 113 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
UPK1BO75841 RNU6-325P-201ENST00000411132 105 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 AC007215.1-201ENST00000464893 276 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
UPK1BO75841 RPL23AP94-201ENST00000512518 302 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK1BO75841 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 326.3 ms