Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR382-201ENST00000637119 76 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RNU6-179P-201ENST00000363350 107 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 SNORA75.1-201ENST00000391130 148 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.37□□□□□ -2.47
USH2AO75445 C8orf59P1-201ENST00000429930 303 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.37□□□□□ -2.47
USH2AO75445 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 SUMO1P2-201ENST00000452524 304 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC005042.3-201ENST00000453230 174 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC093850.1-201ENST00000454121 251 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.37□□□□□ -2.47
USH2AO75445 RPS20P24-201ENST00000457473 361 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MIR3179-1-201ENST00000578940 84 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MIR3179-2-201ENST00000579107 84 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MIR3179-3-201ENST00000579566 84 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC004241.3-201ENST00000611728 517 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC130324.3-201ENST00000614165 542 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MIR3179-4-201ENST00000617599 84 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MTCO3P5-201ENST00000433620 714 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.37□□□□□ -2.47
USH2AO75445 TIMM9P1-201ENST00000436122 256 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC099677.2-201ENST00000436385 175 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MTCO1P19-201ENST00000443487 500 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RNU6-850P-201ENST00000516934 103 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.37□□□□□ -2.47
USH2AO75445 SNORA25.18-201ENST00000607153 114 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RNU6-87P-201ENST00000607561 108 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC116165.2-201ENST00000616705 206 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MTND4P5-201ENST00000435821 1374 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 MIR148A-201ENST00000362215 68 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 SNORD113-7-201ENST00000363762 77 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 SNORA8.2-201ENST00000384372 139 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RAB28P5-201ENST00000427490 651 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.38□□□□□ -2.47
USH2AO75445 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-0.38□□□□□ -2.47
USH2AO75445 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.38□□□□□ -2.47
USH2AO75445 AL583856.2-201ENST00000606298 543 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 SCARNA4-202ENST00000625402 129 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 MIR1283-2-201ENST00000408621 87 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.38□□□□□ -2.47
USH2AO75445 AC074133.1-201ENST00000515696 183 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 AC009032.1-201ENST00000617574 431 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 AC010975.3-201ENST00000618727 978 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 AC017037.3-201ENST00000625016 472 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 MIR499B-201ENST00000636498 73 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
USH2AO75445 RNY3P9-201ENST00000384727 106 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 SNORA26-201ENST00000391286 122 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 AC010154.1-201ENST00000425857 269 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.38□□□□□ -2.47
USH2AO75445 AC131159.1-201ENST00000621854 213 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.38□□□□□ -2.47
USH2AO75445 SNORA72.1-201ENST00000363485 129 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RNU6-652P-201ENST00000365488 107 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RNY4P10-201ENST00000365571 96 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
USH2AO75445 RNU2-21P-201ENST00000410368 188 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RPL32P14-201ENST00000463196 378 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RNU6-412P-201ENST00000516434 106 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.38□□□□□ -2.47
USH2AO75445 PCNPP3-201ENST00000393579 471 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.39□□□□□ -2.47
USH2AO75445 AL008629.1-201ENST00000438615 184 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 MIR18B-201ENST00000454574 71 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC245047.8-201ENST00000456455 284 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 RNA5SP481-201ENST00000516814 122 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC060788.1-201ENST00000521318 469 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC-0.39□□□□□ -2.47
USH2AO75445 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.39□□□□□ -2.47
USH2AO75445 AC126365.2-201ENST00000580630 379 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC104695.3-201ENST00000604052 296 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC095031.1-201ENST00000623685 672 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 MTCO1P5-201ENST00000433573 344 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.39□□□□□ -2.47
USH2AO75445 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-0.39□□□□□ -2.47
USH2AO75445 RNU6-94P-201ENST00000607728 107 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AL391903.3-201ENST00000612158 163 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 SMIM11P1-201ENST00000369586 178 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 MIR8485-201ENST00000401372 91 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 MTATP6P20-201ENST00000414147 562 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AL355994.1-201ENST00000424379 260 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 MTCYBP10-201ENST00000424905 650 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC105417.1-201ENST00000514691 285 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 RNA5SP437-201ENST00000517249 129 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.39□□□□□ -2.47
USH2AO75445 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 PCNPP5-201ENST00000452246 481 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms