Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.77□□□□□ -1.81
PRPF40AO75400 AC009969.1-201ENST00000438726 172 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.77□□□□□ -1.81
PRPF40AO75400 SNORA81.3-201ENST00000517283 198 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.77□□□□□ -1.81
PRPF40AO75400 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.77□□□□□ -1.81
PRPF40AO75400 AP002001.1-203ENST00000534002 267 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 RPL21P9-201ENST00000556149 474 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 MIR7157-201ENST00000635801 60 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
PRPF40AO75400 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PRPF40AO75400 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF40AO75400 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF40AO75400 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF40AO75400 Y_RNA.29-201ENST00000362570 113 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 Y_RNA.83-201ENST00000363005 113 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 Y_RNA.117-201ENST00000363294 101 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 Y_RNA.274-201ENST00000364714 101 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 RNU6-209P-201ENST00000384118 107 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 SNORA46-201ENST00000384762 135 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 MIR490-201ENST00000384865 128 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 MIR218-1-201ENST00000384999 110 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 MIR34B-201ENST00000385076 84 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 MIR1294-201ENST00000408503 142 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 RNU2-61P-201ENST00000411069 191 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 AC009963.1-201ENST00000417265 157 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 RPS12P18-201ENST00000442381 270 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 RPS29P26-201ENST00000477483 171 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 SNORA27.4-201ENST00000516650 95 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.76□□□□□ -1.81
PRPF40AO75400 AC022080.3-201ENST00000544433 482 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF40AO75400 MIR3199-1-201ENST00000582434 88 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF40AO75400 AC098479.1-201ENST00000609225 154 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 MIR7975-201ENST00000619350 68 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 AL356274.2-201ENST00000624379 3752 ntBASIC3.76□□□□□ -1.81
PRPF40AO75400 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF40AO75400 AC010329.5-201ENST00000623497 2174 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.75□□□□□ -1.81
PRPF40AO75400 RNU6-324P-201ENST00000363957 106 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 Y_RNA.199-201ENST00000364014 102 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 RNA5SP72-201ENST00000364442 117 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 RNA5SP504-201ENST00000410676 117 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 RNA5SP229-201ENST00000410809 99 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 AL139156.1-201ENST00000412785 841 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF40AO75400 RPL30P4-201ENST00000429309 333 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 TOMM22P2-201ENST00000430735 237 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 AL138752.1-201ENST00000452964 351 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 AC092185.1-201ENST00000491371 97 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF40AO75400 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF40AO75400 RNU6-966P-201ENST00000516479 104 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 RNA5SP380-201ENST00000517190 98 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 RNU6-586P-201ENST00000517265 104 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF40AO75400 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF40AO75400 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF40AO75400 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF40AO75400 AC103988.1-201ENST00000566382 2177 ntBASIC3.75□□□□□ -1.81
PRPF40AO75400 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PRPF40AO75400 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF40AO75400 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF40AO75400 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRPF40AO75400 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRPF40AO75400 Y_RNA.76-201ENST00000362931 109 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 RNU4-80P-201ENST00000363200 141 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 RNU6-1305P-201ENST00000364353 104 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 Y_RNA.333-201ENST00000365274 102 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 RNU6-1274P-201ENST00000384557 107 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 PIGPP3-201ENST00000425307 415 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF40AO75400 FCF1P8-201ENST00000510322 597 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF40AO75400 SCARNA3-201ENST00000517097 143 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF40AO75400 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF40AO75400 MIR3145-201ENST00000580727 82 ntBASIC3.74□□□□□ -1.81
PRPF40AO75400 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF40AO75400 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.74□□□□□ -1.81
PRPF40AO75400 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRPF40AO75400 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF40AO75400 UBE2WP1-201ENST00000362030 340 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 RNU4-35P-201ENST00000362588 141 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 U3.8-201ENST00000363675 217 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PRPF40AO75400 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF40AO75400 RNU6-1199P-201ENST00000411249 104 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.73□□□□□ -1.81
PRPF40AO75400 AC024067.1-201ENST00000426199 223 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 MICF-203ENST00000432679 129 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 Z75741.1-201ENST00000446793 314 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 PRELID3BP1-201ENST00000457142 540 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 RPL21P10-201ENST00000463521 490 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 SRIP1-201ENST00000489235 288 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 AC083906.5-201ENST00000503722 328 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 RNU6-1098P-201ENST00000516772 96 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms