Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS4BO75351 AC010620.2-201ENST00000600135 313 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS4BO75351 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS4BO75351 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 RNU1-72P-201ENST00000362976 153 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 RNU6-873P-201ENST00000363833 107 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 RNU6-1093P-201ENST00000391194 107 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 AL079342.1-201ENST00000401460 267 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 MIR1261-201ENST00000408659 82 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 SNORD12B-201ENST00000410433 91 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 RNA5SP184-201ENST00000411071 108 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 RNU6-1001P-201ENST00000411265 100 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS4BO75351 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS4BO75351 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS4BO75351 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 SEM1P1-201ENST00000506694 209 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 RNU6-408P-201ENST00000515910 100 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 AC136932.1-201ENST00000574771 208 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 Y_RNA.772-201ENST00000606692 102 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS4BO75351 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
VPS4BO75351 AC069528.2-201ENST00000624849 1991 ntBASIC2.85□□□□□ -1.95
VPS4BO75351 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS4BO75351 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
VPS4BO75351 LINC02555-201ENST00000563933 1951 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 U3.9-201ENST00000363823 204 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 RNU6-505P-201ENST00000384427 107 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 EEF1B2P7-201ENST00000451177 676 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 AC145146.1-201ENST00000496370 254 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 RNY3P15-201ENST00000516297 97 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 CYCSP23-201ENST00000519781 313 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS4BO75351 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS4BO75351 AC027176.1-201ENST00000560204 514 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 AC026470.2-201ENST00000561492 181 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 AC006006.1-201ENST00000603082 144 ntBASIC2.84□□□□□ -1.95
VPS4BO75351 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS4BO75351 ZNF204P-201ENST00000416749 2397 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS4BO75351 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS4BO75351 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS4BO75351 RNU4-82P-201ENST00000362443 140 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 RNU1-62P-201ENST00000362599 164 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 SNORA9.2-201ENST00000365361 133 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 Y_RNA.376-201ENST00000365638 108 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 Y_RNA.396-201ENST00000383949 103 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 SNORD63-201ENST00000384262 68 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 RNU6-713P-201ENST00000384761 107 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 MIR181B1-201ENST00000385240 110 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 MT-TW-201ENST00000387382 68 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 SNORA46.1-201ENST00000391069 153 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 U6atac.2-201ENST00000408644 118 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 TRBV12-1-201ENST00000479785 344 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS4BO75351 AP003733.2-201ENST00000529409 171 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS4BO75351 MIR4423-201ENST00000580922 80 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 RPL30P11-203ENST00000598995 310 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 AC010999.1-201ENST00000611856 324 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS4BO75351 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
VPS4BO75351 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS4BO75351 SNORD32B-201ENST00000364460 84 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS4BO75351 Y_RNA.462-201ENST00000384268 102 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 RN7SKP220-201ENST00000410611 288 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 Y_RNA.618-201ENST00000410949 107 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS4BO75351 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS4BO75351 PCNPP5-201ENST00000452246 481 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS4BO75351 AC117440.1-201ENST00000474107 571 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS4BO75351 AC023824.2-201ENST00000566185 400 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 MIR4319-201ENST00000577285 85 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 MIR4300-201ENST00000581016 96 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 AC023043.3-201ENST00000593113 385 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 SNRPGP20-201ENST00000604477 205 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 MIR7157-201ENST00000635801 60 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS4BO75351 AC138915.1-201ENST00000565427 1685 ntBASIC2.82□□□□□ -1.96
VPS4BO75351 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS4BO75351 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS4BO75351 MIR29B2-201ENST00000385055 81 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AL590004.2-201ENST00000404787 371 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS4BO75351 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS4BO75351 AL445305.1-201ENST00000432577 575 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AC010095.1-201ENST00000443543 144 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 Z96811.1-201ENST00000445880 108 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AC074133.1-201ENST00000515696 183 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 SNORA25.14-201ENST00000516481 132 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms