Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU6-708P-201ENST00000384217 107 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 RNU6-318P-201ENST00000384283 103 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 RNU6-738P-201ENST00000384531 106 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 MTCO3P19-201ENST00000415864 321 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 AC009963.1-201ENST00000417265 157 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.28□□□□□ -2.04
ZIC3O60481 SRIP1-201ENST00000489235 288 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.28□□□□□ -2.04
ZIC3O60481 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 SNORA48.11-201ENST00000517015 89 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 AC091144.1-201ENST00000519573 138 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 AC026470.2-201ENST00000561492 181 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 AC005296.1-201ENST00000616145 209 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 AC005562.2-201ENST00000618264 111 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 U4.3-201ENST00000621047 82 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
ZIC3O60481 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.28□□□□□ -2.04
ZIC3O60481 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ZIC3O60481 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
ZIC3O60481 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ZIC3O60481 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZIC3O60481 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.27□□□□□ -2.05
ZIC3O60481 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
ZIC3O60481 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZIC3O60481 RNU6-1301P-201ENST00000362724 104 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 RNU1-23P-201ENST00000363361 144 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 Y_RNA.162-201ENST00000363683 102 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 RNU6-280P-201ENST00000364145 104 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 RNA5SP240-201ENST00000365355 128 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 SNORA18.2-201ENST00000383865 132 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 RNY3P4-201ENST00000384428 101 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 MIR518C-201ENST00000384822 101 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 MIR628-201ENST00000385229 95 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 RNU2-63P-201ENST00000410792 194 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 AC004866.1-201ENST00000411748 78 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 HMGN2P35-201ENST00000412164 270 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.27□□□□□ -2.05
ZIC3O60481 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.27□□□□□ -2.05
ZIC3O60481 AC104389.3-201ENST00000445629 235 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 MTCO3P8-201ENST00000453691 755 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 RPS27AP9-201ENST00000477681 438 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 AC090517.1-201ENST00000569307 266 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 MIR4513-201ENST00000581077 86 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 SNRPGP20-201ENST00000604477 205 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 AL360085.1-201ENST00000604713 532 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.27□□□□□ -2.05
ZIC3O60481 TCL6_2.1-201ENST00000615162 119 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 AL162373.1-201ENST00000620433 407 ntBASIC2.27□□□□□ -2.05
ZIC3O60481 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.27□□□□□ -2.05
ZIC3O60481 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.27□□□□□ -2.05
ZIC3O60481 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ZIC3O60481 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ZIC3O60481 Y_RNA.27-201ENST00000362540 103 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 RNA5SP361-201ENST00000362686 118 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 RNU1-76P-201ENST00000362903 159 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 RNA5SP456-201ENST00000364002 114 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 SNORD14.1-201ENST00000365609 90 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 RNU6-26P-201ENST00000383985 107 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 Y_RNA.527-201ENST00000384573 102 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 SNORA67.4-201ENST00000384688 142 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 MIR329-1-201ENST00000385028 80 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 RNU6-823P-201ENST00000391042 103 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 MIR1294-201ENST00000408503 142 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 RNU6-985P-201ENST00000410182 104 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 AC113618.1-201ENST00000416747 285 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.26□□□□□ -2.05
ZIC3O60481 AC004386.2-201ENST00000441858 148 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.26□□□□□ -2.05
ZIC3O60481 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.26□□□□□ -2.05
ZIC3O60481 SNORA25.14-201ENST00000516481 132 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 Y_RNA.721-201ENST00000517207 102 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.26□□□□□ -2.05
ZIC3O60481 AC040926.1-201ENST00000530195 238 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.26□□□□□ -2.05
ZIC3O60481 CBX3P7-201ENST00000532876 502 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 AC093023.1-201ENST00000547375 507 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.26□□□□□ -2.05
ZIC3O60481 AC023824.2-201ENST00000566185 400 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.26□□□□□ -2.05
ZIC3O60481 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.26□□□□□ -2.05
ZIC3O60481 RPL17P51-201ENST00000605218 238 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 AC116312.1-201ENST00000606841 314 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 Z82209.1-201ENST00000422141 2135 ntBASIC2.26□□□□□ -2.05
ZIC3O60481 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ZIC3O60481 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.25□□□□□ -2.05
ZIC3O60481 RNU1-62P-201ENST00000362599 164 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 VTRNA1-1-201ENST00000363120 99 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 RNU6-879P-201ENST00000364328 108 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 Y_RNA.424-201ENST00000384063 103 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 RNU6-1145P-201ENST00000384246 107 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 MIR592-201ENST00000384959 97 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 MIR320B2-201ENST00000408479 138 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 RNU2-48P-201ENST00000410694 191 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 RNU6-1001P-201ENST00000411265 100 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 MTND2P23-201ENST00000422990 651 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 AL513328.1-201ENST00000446460 224 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.25□□□□□ -2.05
ZIC3O60481 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms