Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 MIR4423-201ENST00000580922 80 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.05□□□□□ -1.92
KDM1AO60341 SNORD11B-201ENST00000607707 90 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.05□□□□□ -1.92
KDM1AO60341 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.05□□□□□ -1.92
KDM1AO60341 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KDM1AO60341 Y_RNA.84-201ENST00000363011 104 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 snoU2_19.2-201ENST00000363024 80 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 Y_RNA.188-201ENST00000363952 111 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 RNU2-25P-201ENST00000411041 191 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 RNU6-625P-201ENST00000459412 107 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 snoU13.22-201ENST00000459428 104 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 AC117440.1-201ENST00000474107 571 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.04□□□□□ -1.92
KDM1AO60341 RNU1-143P-201ENST00000516296 146 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 AC023157.2-201ENST00000540596 141 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.04□□□□□ -1.92
KDM1AO60341 AK6P2-201ENST00000549020 471 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 AC018448.1-201ENST00000552843 316 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 YPEL5P2-201ENST00000605553 359 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 U1.23-201ENST00000610293 146 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 RNU1-68P-201ENST00000615382 146 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 U1.39-201ENST00000621562 146 ntBASIC3.04□□□□□ -1.92
KDM1AO60341 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.04□□□□□ -1.92
KDM1AO60341 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KDM1AO60341 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
KDM1AO60341 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.03□□□□□ -1.92
KDM1AO60341 SNORD113-8-201ENST00000363497 74 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 RNU6-944P-201ENST00000364023 107 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 Y_RNA.230-201ENST00000364348 109 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 RNU6-20P-201ENST00000384106 107 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 MIR215-201ENST00000384858 110 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 AL033519.2-201ENST00000403958 392 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 RNU6-1203P-201ENST00000410703 110 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 RNU5A-5P-201ENST00000411054 116 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
KDM1AO60341 ARL5AP4-201ENST00000430731 512 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.03□□□□□ -1.92
KDM1AO60341 RNU2-44P-201ENST00000516795 194 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 RNU6-826P-201ENST00000516827 104 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.03□□□□□ -1.92
KDM1AO60341 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
KDM1AO60341 AC023043.3-201ENST00000593113 385 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
KDM1AO60341 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.03□□□□□ -1.92
KDM1AO60341 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
KDM1AO60341 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
KDM1AO60341 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
KDM1AO60341 SNORD81.1-201ENST00000363064 77 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 RNU6-626P-201ENST00000363354 107 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 Y_RNA.307-201ENST00000365022 117 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 SNORA70.4-201ENST00000365509 134 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 Y_RNA.415-201ENST00000384012 112 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 Y_RNA.570-201ENST00000384750 101 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 Y_RNA.602-201ENST00000410535 92 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 CBX3P6-201ENST00000430257 527 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 SNORD127-201ENST00000458892 86 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 RNU6-1132P-201ENST00000459214 107 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.02□□□□□ -1.93
KDM1AO60341 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 RNU6-1271P-201ENST00000517049 105 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.02□□□□□ -1.93
KDM1AO60341 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.02□□□□□ -1.93
KDM1AO60341 AC005176.2-201ENST00000596933 147 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 MIR3651-201ENST00000630427 90 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 AC068205.3-201ENST00000636385 468 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.02□□□□□ -1.93
KDM1AO60341 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KDM1AO60341 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.01□□□□□ -1.93
KDM1AO60341 RNU6-461P-201ENST00000364195 107 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 SNORA71.1-201ENST00000364523 117 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 SNORA11.1-201ENST00000408133 129 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 MIR1294-201ENST00000408503 142 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 RNU2-38P-201ENST00000410856 79 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 ELOCP21-201ENST00000412558 336 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 AL390729.2-201ENST00000416137 156 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 RAB28P5-201ENST00000427490 651 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 RNU6-496P-201ENST00000516145 99 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 RNU1-117P-201ENST00000517041 158 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.01□□□□□ -1.93
KDM1AO60341 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.01□□□□□ -1.93
KDM1AO60341 AC018630.3-201ENST00000542637 96 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.01□□□□□ -1.93
KDM1AO60341 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.01□□□□□ -1.93
KDM1AO60341 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.01□□□□□ -1.93
KDM1AO60341 MIR5739-201ENST00000619803 80 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 MIR8057-201ENST00000620957 69 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 AC008873.1-201ENST00000625051 138 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 AC010615.1-201ENST00000594254 1764 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 Z82209.1-201ENST00000422141 2135 ntBASIC3.01□□□□□ -1.93
KDM1AO60341 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KDM1AO60341 MIR22-201ENST00000362190 85 ntBASIC3□□□□□ -1.93
KDM1AO60341 MIR208A-201ENST00000362287 71 ntBASIC3□□□□□ -1.93
KDM1AO60341 Y_RNA.333-201ENST00000365274 102 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms