Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORA68.1-201ENST00000364537 132 ntBASIC2.45□□□□□ -2.02
LDB2O43679 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
LDB2O43679 SNORA51.11-201ENST00000384442 131 ntBASIC2.45□□□□□ -2.02
LDB2O43679 RNU6-159P-201ENST00000391080 106 ntBASIC2.45□□□□□ -2.02
LDB2O43679 MIR208B-201ENST00000401172 77 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AL359511.1-201ENST00000402970 211 ntBASIC2.45□□□□□ -2.02
LDB2O43679 RNA5SP201-201ENST00000410316 124 ntBASIC2.45□□□□□ -2.02
LDB2O43679 HMGB3P2-201ENST00000411913 584 ntBASIC2.45□□□□□ -2.02
LDB2O43679 EIF1P2-201ENST00000428233 350 ntBASIC2.45□□□□□ -2.02
LDB2O43679 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.45□□□□□ -2.02
LDB2O43679 RPS15AP7-201ENST00000439294 405 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.45□□□□□ -2.02
LDB2O43679 U8.20-201ENST00000459445 131 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
LDB2O43679 RNA5SP54-201ENST00000516951 92 ntBASIC2.45□□□□□ -2.02
LDB2O43679 RNU6-58P-201ENST00000517143 103 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AP002770.2-201ENST00000543613 532 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AC027176.1-201ENST00000560204 514 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.45□□□□□ -2.02
LDB2O43679 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.45□□□□□ -2.02
LDB2O43679 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.45□□□□□ -2.02
LDB2O43679 AL390123.1-201ENST00000603216 237 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AL021879.1-201ENST00000611756 288 ntBASIC2.45□□□□□ -2.02
LDB2O43679 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.45□□□□□ -2.02
LDB2O43679 MIR7515-201ENST00000637837 67 ntBASIC2.45□□□□□ -2.02
LDB2O43679 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.45□□□□□ -2.02
LDB2O43679 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LDB2O43679 MIR6073-201ENST00000352083 89 ntBASIC2.44□□□□□ -2.02
LDB2O43679 RNU4-15P-201ENST00000362613 141 ntBASIC2.44□□□□□ -2.02
LDB2O43679 RNU1-76P-201ENST00000362903 159 ntBASIC2.44□□□□□ -2.02
LDB2O43679 Y_RNA.133-201ENST00000363428 110 ntBASIC2.44□□□□□ -2.02
LDB2O43679 RNY3P4-201ENST00000384428 101 ntBASIC2.44□□□□□ -2.02
LDB2O43679 MIR487A-201ENST00000385009 80 ntBASIC2.44□□□□□ -2.02
LDB2O43679 MIR10B-201ENST00000385011 110 ntBASIC2.44□□□□□ -2.02
LDB2O43679 RNA5SP213-201ENST00000391031 106 ntBASIC2.44□□□□□ -2.02
LDB2O43679 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
LDB2O43679 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB2O43679 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.44□□□□□ -2.02
LDB2O43679 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.44□□□□□ -2.02
LDB2O43679 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.44□□□□□ -2.02
LDB2O43679 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB2O43679 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB2O43679 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.44□□□□□ -2.02
LDB2O43679 AC007215.1-201ENST00000464893 276 ntBASIC2.44□□□□□ -2.02
LDB2O43679 TRBV12-1-201ENST00000479785 344 ntBASIC2.44□□□□□ -2.02
LDB2O43679 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.44□□□□□ -2.02
LDB2O43679 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.44□□□□□ -2.02
LDB2O43679 AC022868.1-201ENST00000517767 391 ntBASIC2.44□□□□□ -2.02
LDB2O43679 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB2O43679 AC008121.3-201ENST00000618726 433 ntBASIC2.44□□□□□ -2.02
LDB2O43679 MIR7157-201ENST00000635801 60 ntBASIC2.44□□□□□ -2.02
LDB2O43679 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LDB2O43679 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LDB2O43679 AC016717.2-201ENST00000609089 5141 ntBASIC2.43□□□□□ -2.02
LDB2O43679 Y_RNA.152-201ENST00000363578 100 ntBASIC2.43□□□□□ -2.02
LDB2O43679 SET-203ENST00000372688 801 ntTSL 2 BASIC2.43□□□□□ -2.02
LDB2O43679 RNU6-708P-201ENST00000384217 107 ntBASIC2.43□□□□□ -2.02
LDB2O43679 Y_RNA.551-201ENST00000384661 102 ntBASIC2.43□□□□□ -2.02
LDB2O43679 AL139095.1-201ENST00000404326 391 ntBASIC2.43□□□□□ -2.02
LDB2O43679 RNU6-1328P-201ENST00000410938 106 ntBASIC2.43□□□□□ -2.02
LDB2O43679 AC009963.1-201ENST00000417265 157 ntBASIC2.43□□□□□ -2.02
LDB2O43679 AC096638.1-201ENST00000444678 216 ntBASIC2.43□□□□□ -2.02
LDB2O43679 MTATP8P1-201ENST00000467115 207 ntBASIC2.43□□□□□ -2.02
LDB2O43679 AC034114.1-201ENST00000520293 285 ntBASIC2.43□□□□□ -2.02
LDB2O43679 AC131281.1-201ENST00000522984 164 ntBASIC2.43□□□□□ -2.02
LDB2O43679 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.43□□□□□ -2.02
LDB2O43679 RPL30P11-203ENST00000598995 310 ntBASIC2.43□□□□□ -2.02
LDB2O43679 AL670379.2-201ENST00000604983 252 ntBASIC2.43□□□□□ -2.02
LDB2O43679 PRR13P7-201ENST00000605538 430 ntBASIC2.43□□□□□ -2.02
LDB2O43679 PCGEM1.1-201ENST00000613431 131 ntBASIC2.43□□□□□ -2.02
LDB2O43679 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LDB2O43679 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.42□□□□□ -2.02
LDB2O43679 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
LDB2O43679 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
LDB2O43679 RNU6-1301P-201ENST00000362724 104 ntBASIC2.42□□□□□ -2.02
LDB2O43679 RNU5F-3P-201ENST00000363767 117 ntBASIC2.42□□□□□ -2.02
LDB2O43679 RNU6-378P-201ENST00000384324 107 ntBASIC2.42□□□□□ -2.02
LDB2O43679 RNU6-1093P-201ENST00000391194 107 ntBASIC2.42□□□□□ -2.02
LDB2O43679 SDAD1P3-201ENST00000427380 333 ntBASIC2.42□□□□□ -2.02
LDB2O43679 WARS2P1-201ENST00000429678 537 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC073910.1-201ENST00000445047 438 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC010655.3-201ENST00000478818 450 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC145146.1-201ENST00000496370 254 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.42□□□□□ -2.02
LDB2O43679 MRPS35P2-201ENST00000508242 191 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.42□□□□□ -2.02
LDB2O43679 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.42□□□□□ -2.02
LDB2O43679 UBL5P4-201ENST00000562584 236 ntBASIC2.42□□□□□ -2.02
LDB2O43679 MIR5695-201ENST00000579717 85 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
LDB2O43679 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.42□□□□□ -2.02
LDB2O43679 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.42□□□□□ -2.02
LDB2O43679 AC005296.1-201ENST00000616145 209 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
LDB2O43679 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.42□□□□□ -2.02
LDB2O43679 BX322639.1-202ENST00000423987 2213 ntBASIC2.42□□□□□ -2.02
LDB2O43679 AC135776.4-201ENST00000624300 1904 ntBASIC2.41□□□□□ -2.02
LDB2O43679 snoU2_19.1-201ENST00000362361 80 ntBASIC2.41□□□□□ -2.02
LDB2O43679 U3.9-201ENST00000363823 204 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms