Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL162725.1-201ENST00000435405 301 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 AC005002.2-201ENST00000438228 269 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGB3O15347 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGB3O15347 MTND4LP26-201ENST00000518144 282 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGB3O15347 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGB3O15347 AC131055.1-201ENST00000584626 316 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 AC004223.2-201ENST00000590309 544 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 AC097065.2-201ENST00000608159 533 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 AL096861.1-201ENST00000610899 123 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 TCL6_2.1-201ENST00000615162 119 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 7SK.10-201ENST00000621414 298 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.12□□□□□ -2.39
HMGB3O15347 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 RNY1P10-201ENST00000363268 113 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 RNU6-179P-201ENST00000363350 107 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 Y_RNA.302-201ENST00000364997 102 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 SNORD115-7-201ENST00000365306 82 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 SNORD114-22-201ENST00000365423 72 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 RNU6-342P-201ENST00000384521 104 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 RNU2-8P-201ENST00000410727 190 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 CDK8P2-201ENST00000415020 547 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 MRPS18CP6-201ENST00000423587 223 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AC004386.2-201ENST00000441858 148 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 MTCO2P7-201ENST00000446518 666 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGB3O15347 LINC01399-202ENST00000458450 244 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AC112204.1-201ENST00000502591 103 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 RNU7-128P-201ENST00000517247 62 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AC105185.1-201ENST00000518705 535 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AC026470.2-201ENST00000561492 181 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 MIR4498-201ENST00000577599 66 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AC011195.1-201ENST00000578177 177 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.11□□□□□ -2.39
HMGB3O15347 AC091805.2-201ENST00000603848 235 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 AL021368.1-201ENST00000607490 540 ntBASIC0.11□□□□□ -2.39
HMGB3O15347 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
HMGB3O15347 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGB3O15347 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGB3O15347 AP000568.1-201ENST00000282964 442 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 RNU6-1303P-201ENST00000364841 107 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 RNU6-116P-201ENST00000384042 109 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 MIR586-201ENST00000385035 97 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 MIR23A-201ENST00000385245 73 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 RNU6-757P-201ENST00000410334 100 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 RNA5SP504-201ENST00000410676 117 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 AL354692.1-201ENST00000423044 315 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 MTCYBP10-201ENST00000424905 650 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 RNU7-57P-201ENST00000459540 60 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 AC022868.1-201ENST00000517767 391 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 AC025647.1-201ENST00000517879 253 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 AC109810.1-201ENST00000534066 224 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 AC016256.1-201ENST00000547971 354 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 MIR5006-201ENST00000583027 110 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
HMGB3O15347 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
HMGB3O15347 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
HMGB3O15347 RNU6-931P-201ENST00000363850 107 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 RNA5SP222-201ENST00000411039 105 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 RNU2-72P-201ENST00000411175 163 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 RNU6-57P-201ENST00000411348 103 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 MTATP6P16-201ENST00000434543 526 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 MTCO1P19-201ENST00000443487 500 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 AC009237.7-201ENST00000447357 229 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 AC074290.1-201ENST00000448883 135 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 FABP5P5-201ENST00000515537 406 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 RNU6-496P-201ENST00000516145 99 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 AP003181.2-201ENST00000528941 181 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 AP000889.1-201ENST00000530968 660 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 AC103996.1-201ENST00000555468 102 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGB3O15347 AL158211.2-201ENST00000607282 395 ntBASIC0.09□□□□□ -2.4
HMGB3O15347 RNU6-1240P-201ENST00000365155 104 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 RNU6-715P-201ENST00000365204 103 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 MIR548J-201ENST00000408833 112 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 RPS27AP14-201ENST00000422868 454 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGB3O15347 AC104332.1-201ENST00000440471 797 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 STAG3L5P-204ENST00000443759 179 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 EXOSC3P1-201ENST00000448649 500 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGB3O15347 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.08□□□□□ -2.4
HMGB3O15347 AC116562.3-201ENST00000506136 177 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.08□□□□□ -2.4
HMGB3O15347 AC068587.5-201ENST00000528506 175 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGB3O15347 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGB3O15347 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.08□□□□□ -2.4
HMGB3O15347 AC100810.6-201ENST00000638068 285 ntBASIC0.08□□□□□ -2.4
HMGB3O15347 MIR337-201ENST00000362281 93 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 RNA5SP264-201ENST00000363115 107 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 RNU4-92P-201ENST00000363783 136 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 RNY1P8-201ENST00000383970 114 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 SNORA36.2-201ENST00000384004 127 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 RNU6-424P-201ENST00000384367 105 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 AC004866.1-201ENST00000411748 78 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 RPS3AP3-201ENST00000411933 242 ntBASIC0.07□□□□□ -2.4
HMGB3O15347 ELOCP4-201ENST00000420090 333 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms