Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 U2.5-201ENST00000619465 191 ntBASIC2.75□□□□□ -1.97
APAF1O14727 U2.10-201ENST00000620268 191 ntBASIC2.75□□□□□ -1.97
APAF1O14727 AC104985.2-201ENST00000620598 500 ntBASIC2.75□□□□□ -1.97
APAF1O14727 MTND4LP32-201ENST00000636111 270 ntBASIC2.75□□□□□ -1.97
APAF1O14727 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
APAF1O14727 RNU4-79P-201ENST00000362764 141 ntBASIC2.74□□□□□ -1.97
APAF1O14727 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.74□□□□□ -1.97
APAF1O14727 RNU6-890P-201ENST00000384121 107 ntBASIC2.74□□□□□ -1.97
APAF1O14727 SNORD116-29-201ENST00000384516 83 ntBASIC2.74□□□□□ -1.97
APAF1O14727 MIR524-201ENST00000385242 87 ntBASIC2.74□□□□□ -1.97
APAF1O14727 MIR190B-201ENST00000401119 79 ntBASIC2.74□□□□□ -1.97
APAF1O14727 MIR300-201ENST00000401138 83 ntBASIC2.74□□□□□ -1.97
APAF1O14727 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.74□□□□□ -1.97
APAF1O14727 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.74□□□□□ -1.97
APAF1O14727 AC027124.2-201ENST00000428249 105 ntBASIC2.74□□□□□ -1.97
APAF1O14727 AC107032.1-201ENST00000485945 480 ntBASIC2.74□□□□□ -1.97
APAF1O14727 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.74□□□□□ -1.97
APAF1O14727 RNU6-470P-201ENST00000515954 104 ntBASIC2.74□□□□□ -1.97
APAF1O14727 SNORA31.11-201ENST00000516528 139 ntBASIC2.74□□□□□ -1.97
APAF1O14727 AC091144.1-201ENST00000519573 138 ntBASIC2.74□□□□□ -1.97
APAF1O14727 PRELID2P1-201ENST00000552837 301 ntBASIC2.74□□□□□ -1.97
APAF1O14727 AC027288.2-201ENST00000553028 243 ntBASIC2.74□□□□□ -1.97
APAF1O14727 MIR4795-201ENST00000584182 89 ntBASIC2.74□□□□□ -1.97
APAF1O14727 C8orf59P2-201ENST00000603441 271 ntBASIC2.74□□□□□ -1.97
APAF1O14727 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.74□□□□□ -1.97
APAF1O14727 AC084781.2-201ENST00000615568 161 ntBASIC2.74□□□□□ -1.97
APAF1O14727 MIR1248-201ENST00000629190 106 ntBASIC2.74□□□□□ -1.97
APAF1O14727 RNU6-490P-201ENST00000362985 107 ntBASIC2.73□□□□□ -1.97
APAF1O14727 Y_RNA.146-201ENST00000363549 102 ntBASIC2.73□□□□□ -1.97
APAF1O14727 RNA5SP160-201ENST00000364866 120 ntBASIC2.73□□□□□ -1.97
APAF1O14727 RNU6-301P-201ENST00000384277 107 ntBASIC2.73□□□□□ -1.97
APAF1O14727 MIR29C-201ENST00000385231 88 ntBASIC2.73□□□□□ -1.97
APAF1O14727 RNU6-159P-201ENST00000391080 106 ntBASIC2.73□□□□□ -1.97
APAF1O14727 AL353997.1-201ENST00000432936 108 ntBASIC2.73□□□□□ -1.97
APAF1O14727 UBE2V1P7-201ENST00000446395 340 ntBASIC2.73□□□□□ -1.97
APAF1O14727 AC009237.7-201ENST00000447357 229 ntBASIC2.73□□□□□ -1.97
APAF1O14727 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.73□□□□□ -1.97
APAF1O14727 SNORA4.4-201ENST00000515921 135 ntBASIC2.73□□□□□ -1.97
APAF1O14727 RNU2-44P-201ENST00000516795 194 ntBASIC2.73□□□□□ -1.97
APAF1O14727 RNU7-4P-201ENST00000516961 62 ntBASIC2.73□□□□□ -1.97
APAF1O14727 AC093027.1-201ENST00000546698 429 ntBASIC2.73□□□□□ -1.97
APAF1O14727 AC004584.2-201ENST00000570407 410 ntBASIC2.73□□□□□ -1.97
APAF1O14727 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.73□□□□□ -1.97
APAF1O14727 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.73□□□□□ -1.97
APAF1O14727 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.73□□□□□ -1.97
APAF1O14727 Y_RNA.783-201ENST00000613546 102 ntBASIC2.73□□□□□ -1.97
APAF1O14727 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
APAF1O14727 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
APAF1O14727 SNORD31B-201ENST00000364977 69 ntBASIC2.72□□□□□ -1.97
APAF1O14727 Y_RNA.364-201ENST00000365532 101 ntBASIC2.72□□□□□ -1.97
APAF1O14727 SNORA18.2-201ENST00000383865 132 ntBASIC2.72□□□□□ -1.97
APAF1O14727 RNU6-1026P-201ENST00000384465 108 ntBASIC2.72□□□□□ -1.97
APAF1O14727 AL079342.1-201ENST00000401460 267 ntBASIC2.72□□□□□ -1.97
APAF1O14727 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.72□□□□□ -1.97
APAF1O14727 PRELID3BP1-201ENST00000457142 540 ntBASIC2.72□□□□□ -1.97
APAF1O14727 AC022493.2-201ENST00000506122 481 ntBASIC2.72□□□□□ -1.97
APAF1O14727 RNU6-1114P-201ENST00000516022 107 ntBASIC2.72□□□□□ -1.97
APAF1O14727 RNU6-1098P-201ENST00000516772 96 ntBASIC2.72□□□□□ -1.97
APAF1O14727 RNA5SP490-201ENST00000517141 136 ntBASIC2.72□□□□□ -1.97
APAF1O14727 MIR2355-201ENST00000517199 87 ntBASIC2.72□□□□□ -1.97
APAF1O14727 MIR5006-201ENST00000583027 110 ntBASIC2.72□□□□□ -1.97
APAF1O14727 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.72□□□□□ -1.97
APAF1O14727 ZNF204P-201ENST00000416749 2397 ntBASIC2.71□□□□□ -1.98
APAF1O14727 RNU1-62P-201ENST00000362599 164 ntBASIC2.71□□□□□ -1.98
APAF1O14727 Y_RNA.99-201ENST00000363138 105 ntBASIC2.71□□□□□ -1.98
APAF1O14727 RNU6-438P-201ENST00000365561 103 ntBASIC2.71□□□□□ -1.98
APAF1O14727 RNU6-1040P-201ENST00000383974 107 ntBASIC2.71□□□□□ -1.98
APAF1O14727 SNORA80E-201ENST00000384744 137 ntBASIC2.71□□□□□ -1.98
APAF1O14727 MIR625-201ENST00000385047 85 ntBASIC2.71□□□□□ -1.98
APAF1O14727 RNU1-139P-201ENST00000391307 165 ntBASIC2.71□□□□□ -1.98
APAF1O14727 MTND4P28-201ENST00000426217 387 ntBASIC2.71□□□□□ -1.98
APAF1O14727 USP9YP16-201ENST00000430287 407 ntBASIC2.71□□□□□ -1.98
APAF1O14727 MTCO3P29-201ENST00000432119 779 ntBASIC2.71□□□□□ -1.98
APAF1O14727 AC099799.1-201ENST00000439809 192 ntBASIC2.71□□□□□ -1.98
APAF1O14727 AC004386.2-201ENST00000441858 148 ntBASIC2.71□□□□□ -1.98
APAF1O14727 RPL23AP7-203ENST00000449021 469 ntBASIC2.71□□□□□ -1.98
APAF1O14727 HMGN2P18-201ENST00000450680 270 ntBASIC2.71□□□□□ -1.98
APAF1O14727 USP9YP23-201ENST00000455085 407 ntBASIC2.71□□□□□ -1.98
APAF1O14727 MTCO3P10-201ENST00000455912 772 ntBASIC2.71□□□□□ -1.98
APAF1O14727 RNU7-14P-201ENST00000459331 62 ntBASIC2.71□□□□□ -1.98
APAF1O14727 TOMM22P6-201ENST00000465035 409 ntBASIC2.71□□□□□ -1.98
APAF1O14727 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.71□□□□□ -1.98
APAF1O14727 RPS29P21-201ENST00000496272 170 ntBASIC2.71□□□□□ -1.98
APAF1O14727 RNU6-344P-201ENST00000516635 111 ntBASIC2.71□□□□□ -1.98
APAF1O14727 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.71□□□□□ -1.98
APAF1O14727 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.71□□□□□ -1.98
APAF1O14727 AL355802.3-201ENST00000607571 545 ntBASIC2.71□□□□□ -1.98
APAF1O14727 MIR219B-201ENST00000637023 88 ntBASIC2.71□□□□□ -1.98
APAF1O14727 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APAF1O14727 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
APAF1O14727 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APAF1O14727 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APAF1O14727 AC073544.1-201ENST00000600110 1595 ntBASIC2.7□□□□□ -1.98
APAF1O14727 RNU6-797P-201ENST00000363101 109 ntBASIC2.7□□□□□ -1.98
APAF1O14727 RNA5SP270-201ENST00000411361 118 ntBASIC2.7□□□□□ -1.98
APAF1O14727 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.7□□□□□ -1.98
APAF1O14727 AL445646.1-201ENST00000431784 216 ntBASIC2.7□□□□□ -1.98
APAF1O14727 MTND3P23-201ENST00000431980 347 ntBASIC2.7□□□□□ -1.98
APAF1O14727 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.7□□□□□ -1.98
APAF1O14727 AC093259.1-201ENST00000509755 300 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms