Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDX4O14627 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDX4O14627 Y_RNA.2-201ENST00000362330 96 ntBASIC1.84□□□□□ -2.11
CDX4O14627 Y_RNA.132-201ENST00000363421 102 ntBASIC1.84□□□□□ -2.11
CDX4O14627 RNU6-1141P-201ENST00000364520 107 ntBASIC1.84□□□□□ -2.11
CDX4O14627 MIR95-201ENST00000385072 81 ntBASIC1.84□□□□□ -2.11
CDX4O14627 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.84□□□□□ -2.11
CDX4O14627 AC243964.1-201ENST00000441814 261 ntBASIC1.84□□□□□ -2.11
CDX4O14627 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX4O14627 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX4O14627 RPL30P1-201ENST00000488676 339 ntBASIC1.84□□□□□ -2.11
CDX4O14627 AC114801.2-201ENST00000503825 781 ntBASIC1.84□□□□□ -2.11
CDX4O14627 RNU6-120P-201ENST00000516077 103 ntBASIC1.84□□□□□ -2.11
CDX4O14627 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.84□□□□□ -2.11
CDX4O14627 SNORA48.11-201ENST00000517015 89 ntBASIC1.84□□□□□ -2.11
CDX4O14627 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX4O14627 AC121758.2-201ENST00000553271 193 ntBASIC1.84□□□□□ -2.11
CDX4O14627 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
CDX4O14627 CPDP1-201ENST00000579660 283 ntBASIC1.84□□□□□ -2.11
CDX4O14627 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.84□□□□□ -2.11
CDX4O14627 AL713866.2-201ENST00000603579 219 ntBASIC1.84□□□□□ -2.11
CDX4O14627 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX4O14627 AL159153.1-201ENST00000619688 317 ntBASIC1.84□□□□□ -2.11
CDX4O14627 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.84□□□□□ -2.11
CDX4O14627 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CDX4O14627 AP000560.1-201ENST00000624150 1937 ntBASIC1.83□□□□□ -2.12
CDX4O14627 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDX4O14627 Y_RNA.48-201ENST00000362710 103 ntBASIC1.83□□□□□ -2.12
CDX4O14627 RNU1-72P-201ENST00000362976 153 ntBASIC1.83□□□□□ -2.12
CDX4O14627 Y_RNA.187-201ENST00000363918 113 ntBASIC1.83□□□□□ -2.12
CDX4O14627 RNU4-56P-201ENST00000364700 142 ntBASIC1.83□□□□□ -2.12
CDX4O14627 RNU6-890P-201ENST00000384121 107 ntBASIC1.83□□□□□ -2.12
CDX4O14627 Y_RNA.466-201ENST00000384294 113 ntBASIC1.83□□□□□ -2.12
CDX4O14627 RNU6-933P-201ENST00000384424 107 ntBASIC1.83□□□□□ -2.12
CDX4O14627 MIR521-1-201ENST00000384902 87 ntBASIC1.83□□□□□ -2.12
CDX4O14627 MIR561-201ENST00000385216 97 ntBASIC1.83□□□□□ -2.12
CDX4O14627 SNORA67.5-201ENST00000391036 107 ntBASIC1.83□□□□□ -2.12
CDX4O14627 SNORD23.1-201ENST00000408212 104 ntBASIC1.83□□□□□ -2.12
CDX4O14627 MTND3P9-201ENST00000429526 346 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AL133396.1-201ENST00000432048 687 ntBASIC1.83□□□□□ -2.12
CDX4O14627 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX4O14627 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.83□□□□□ -2.12
CDX4O14627 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.83□□□□□ -2.12
CDX4O14627 ELOCP24-201ENST00000456370 334 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX4O14627 RNU7-152P-201ENST00000458982 64 ntBASIC1.83□□□□□ -2.12
CDX4O14627 U8.21-201ENST00000459536 136 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AC090515.1-201ENST00000465295 476 ntBASIC1.83□□□□□ -2.12
CDX4O14627 FO393415.2-201ENST00000480085 343 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AC022447.4-201ENST00000504053 364 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AC097473.1-201ENST00000508142 408 ntBASIC1.83□□□□□ -2.12
CDX4O14627 SCARNA16.2-201ENST00000516520 172 ntBASIC1.83□□□□□ -2.12
CDX4O14627 RNU7-193P-201ENST00000516723 65 ntBASIC1.83□□□□□ -2.12
CDX4O14627 RNU6-612P-201ENST00000516909 102 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX4O14627 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX4O14627 AC109446.1-201ENST00000566172 220 ntBASIC1.83□□□□□ -2.12
CDX4O14627 MIR5694-201ENST00000581190 76 ntBASIC1.83□□□□□ -2.12
CDX4O14627 MIR3136-201ENST00000583498 78 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AL137847.3-201ENST00000611521 109 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AC007742.2-201ENST00000618226 398 ntBASIC1.83□□□□□ -2.12
CDX4O14627 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AC090971.5-201ENST00000621102 293 ntBASIC1.83□□□□□ -2.12
CDX4O14627 AC090517.3-201ENST00000625170 141 ntBASIC1.83□□□□□ -2.12
CDX4O14627 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDX4O14627 MIRLET7G-201ENST00000362280 84 ntBASIC1.82□□□□□ -2.12
CDX4O14627 Y_RNA.146-201ENST00000363549 102 ntBASIC1.82□□□□□ -2.12
CDX4O14627 U3.13-201ENST00000364804 214 ntBASIC1.82□□□□□ -2.12
CDX4O14627 SNORD42.2-201ENST00000365570 69 ntBASIC1.82□□□□□ -2.12
CDX4O14627 RNU6-474P-201ENST00000384243 107 ntBASIC1.82□□□□□ -2.12
CDX4O14627 SNORA51.11-201ENST00000384442 131 ntBASIC1.82□□□□□ -2.12
CDX4O14627 RNU6-692P-201ENST00000384496 107 ntBASIC1.82□□□□□ -2.12
CDX4O14627 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX4O14627 AL358453.1-201ENST00000422522 250 ntBASIC1.82□□□□□ -2.12
CDX4O14627 AIMP1P2-201ENST00000425294 312 ntBASIC1.82□□□□□ -2.12
CDX4O14627 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX4O14627 MIR2053-201ENST00000459295 91 ntBASIC1.82□□□□□ -2.12
CDX4O14627 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
CDX4O14627 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.82□□□□□ -2.12
CDX4O14627 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.82□□□□□ -2.12
CDX4O14627 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX4O14627 RNU6-1170P-201ENST00000515974 106 ntBASIC1.82□□□□□ -2.12
CDX4O14627 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX4O14627 AL080274.1-201ENST00000605565 220 ntBASIC1.82□□□□□ -2.12
CDX4O14627 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDX4O14627 AC092268.1-201ENST00000342691 405 ntBASIC1.81□□□□□ -2.12
CDX4O14627 Y_RNA.122-201ENST00000363331 96 ntBASIC1.81□□□□□ -2.12
CDX4O14627 Y_RNA.216-201ENST00000364205 93 ntBASIC1.81□□□□□ -2.12
CDX4O14627 RNU6-1227P-201ENST00000383981 107 ntBASIC1.81□□□□□ -2.12
CDX4O14627 MIR1294-201ENST00000408503 142 ntBASIC1.81□□□□□ -2.12
CDX4O14627 RNU2-20P-201ENST00000410425 191 ntBASIC1.81□□□□□ -2.12
CDX4O14627 RN7SKP61-201ENST00000410642 295 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC078809.1-201ENST00000427601 140 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC005534.2-201ENST00000431047 433 ntBASIC1.81□□□□□ -2.12
CDX4O14627 DAP3P1-201ENST00000441522 278 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC009238.1-201ENST00000442165 424 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC009237.6-201ENST00000446969 424 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX4O14627 RPS29P27-201ENST00000463711 170 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC104435.1-201ENST00000483483 166 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms