Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RNU7-180P-201ENST00000459240 63 ntBASIC0.81□□□□□ -2.28
UPK2O00526 RNU7-138P-201ENST00000459479 64 ntBASIC0.81□□□□□ -2.28
UPK2O00526 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.81□□□□□ -2.28
UPK2O00526 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK2O00526 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK2O00526 MTND1P22-201ENST00000510572 951 ntBASIC0.81□□□□□ -2.28
UPK2O00526 AC025465.4-201ENST00000513422 638 ntBASIC0.81□□□□□ -2.28
UPK2O00526 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.81□□□□□ -2.28
UPK2O00526 AC104576.1-201ENST00000524225 88 ntBASIC0.81□□□□□ -2.28
UPK2O00526 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UPK2O00526 AC064836.2-201ENST00000609491 462 ntBASIC0.81□□□□□ -2.28
UPK2O00526 TCL6_2.1-201ENST00000615162 119 ntBASIC0.81□□□□□ -2.28
UPK2O00526 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK2O00526 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UPK2O00526 RNU6-1123P-201ENST00000362347 106 ntBASIC0.8□□□□□ -2.28
UPK2O00526 RNU5B-2P-201ENST00000363036 113 ntBASIC0.8□□□□□ -2.28
UPK2O00526 RNA5SP99-201ENST00000364020 114 ntBASIC0.8□□□□□ -2.28
UPK2O00526 SNORA72.3-201ENST00000365074 132 ntBASIC0.8□□□□□ -2.28
UPK2O00526 RNU6-968P-201ENST00000384076 107 ntBASIC0.8□□□□□ -2.28
UPK2O00526 RNU6-517P-201ENST00000384362 110 ntBASIC0.8□□□□□ -2.28
UPK2O00526 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
UPK2O00526 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
UPK2O00526 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
UPK2O00526 MIR1253-201ENST00000408273 105 ntBASIC0.8□□□□□ -2.28
UPK2O00526 MTATP6P18-201ENST00000417994 673 ntBASIC0.8□□□□□ -2.28
UPK2O00526 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.8□□□□□ -2.28
UPK2O00526 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK2O00526 SNORA31.10-201ENST00000516482 106 ntBASIC0.8□□□□□ -2.28
UPK2O00526 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK2O00526 MIR3941-201ENST00000582572 103 ntBASIC0.8□□□□□ -2.28
UPK2O00526 uc_338.34-201ENST00000617467 174 ntBASIC0.8□□□□□ -2.28
UPK2O00526 AL391987.6-201ENST00000305671 199 ntBASIC0.79□□□□□ -2.28
UPK2O00526 Y_RNA.123-201ENST00000363338 102 ntBASIC0.79□□□□□ -2.28
UPK2O00526 Y_RNA.159-201ENST00000363674 87 ntBASIC0.79□□□□□ -2.28
UPK2O00526 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
UPK2O00526 RNU6-1317P-201ENST00000364582 104 ntBASIC0.79□□□□□ -2.28
UPK2O00526 Y_RNA.381-201ENST00000365666 102 ntBASIC0.79□□□□□ -2.28
UPK2O00526 SNORA70.7-201ENST00000384159 133 ntBASIC0.79□□□□□ -2.28
UPK2O00526 MIR487A-201ENST00000385009 80 ntBASIC0.79□□□□□ -2.28
UPK2O00526 RPL23AP36-201ENST00000413895 458 ntBASIC0.79□□□□□ -2.28
UPK2O00526 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK2O00526 AC016909.1-201ENST00000415916 166 ntBASIC0.79□□□□□ -2.28
UPK2O00526 AL365203.2-201ENST00000423444 196 ntBASIC0.79□□□□□ -2.28
UPK2O00526 MTND4P32-201ENST00000437189 1237 ntBASIC0.79□□□□□ -2.28
UPK2O00526 AC005002.2-201ENST00000438228 269 ntBASIC0.79□□□□□ -2.28
UPK2O00526 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK2O00526 AC009237.7-201ENST00000447357 229 ntBASIC0.79□□□□□ -2.28
UPK2O00526 RPS27P1-201ENST00000450552 247 ntBASIC0.79□□□□□ -2.28
UPK2O00526 AL356010.1-201ENST00000456364 102 ntBASIC0.79□□□□□ -2.28
UPK2O00526 RNU6-1037P-201ENST00000459571 107 ntBASIC0.79□□□□□ -2.28
UPK2O00526 AC026470.2-201ENST00000561492 181 ntBASIC0.79□□□□□ -2.28
UPK2O00526 AC008088.1-201ENST00000580993 280 ntBASIC0.79□□□□□ -2.28
UPK2O00526 AC093424.1-201ENST00000604999 338 ntBASIC0.79□□□□□ -2.28
UPK2O00526 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK2O00526 HULC.1-201ENST00000612720 240 ntBASIC0.79□□□□□ -2.28
UPK2O00526 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.79□□□□□ -2.28
UPK2O00526 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UPK2O00526 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
UPK2O00526 RNU6-1120P-201ENST00000362988 108 ntBASIC0.78□□□□□ -2.28
UPK2O00526 RNU1-124P-201ENST00000363861 145 ntBASIC0.78□□□□□ -2.28
UPK2O00526 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.78□□□□□ -2.28
UPK2O00526 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK2O00526 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK2O00526 RNU7-63P-201ENST00000459054 62 ntBASIC0.78□□□□□ -2.28
UPK2O00526 RNU7-57P-201ENST00000459540 60 ntBASIC0.78□□□□□ -2.28
UPK2O00526 AC092991.1-201ENST00000477176 376 ntBASIC0.78□□□□□ -2.28
UPK2O00526 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK2O00526 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.78□□□□□ -2.28
UPK2O00526 SNORD116-28-201ENST00000516123 91 ntBASIC0.78□□□□□ -2.28
UPK2O00526 RNU6-1146P-201ENST00000516282 102 ntBASIC0.78□□□□□ -2.28
UPK2O00526 RN7SKP287-201ENST00000516546 266 ntBASIC0.78□□□□□ -2.28
UPK2O00526 CYCSP23-201ENST00000519781 313 ntBASIC0.78□□□□□ -2.28
UPK2O00526 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK2O00526 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK2O00526 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.78□□□□□ -2.28
UPK2O00526 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK2O00526 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK2O00526 AC068790.2-201ENST00000602601 557 ntBASIC0.78□□□□□ -2.28
UPK2O00526 HSPE1P19-201ENST00000603327 295 ntBASIC0.78□□□□□ -2.28
UPK2O00526 AC106754.2-201ENST00000623006 233 ntBASIC0.78□□□□□ -2.28
UPK2O00526 AC091931.1-201ENST00000623488 728 ntBASIC0.78□□□□□ -2.28
UPK2O00526 AC018630.2-201ENST00000534866 2403 ntBASIC0.78□□□□□ -2.28
UPK2O00526 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
UPK2O00526 Y_RNA.140-201ENST00000363474 103 ntBASIC0.77□□□□□ -2.29
UPK2O00526 RNU6-996P-201ENST00000365438 107 ntBASIC0.77□□□□□ -2.29
UPK2O00526 RNU6-1286P-201ENST00000383871 107 ntBASIC0.77□□□□□ -2.29
UPK2O00526 RNU6-1031P-201ENST00000384773 107 ntBASIC0.77□□□□□ -2.29
UPK2O00526 MIR515-2-201ENST00000384883 83 ntBASIC0.77□□□□□ -2.29
UPK2O00526 MIR515-1-201ENST00000384884 83 ntBASIC0.77□□□□□ -2.29
UPK2O00526 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK2O00526 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK2O00526 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.77□□□□□ -2.29
UPK2O00526 AL445567.1-201ENST00000439121 144 ntBASIC0.77□□□□□ -2.29
UPK2O00526 AC073415.1-201ENST00000449240 153 ntBASIC0.77□□□□□ -2.29
UPK2O00526 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK2O00526 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK2O00526 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK2O00526 RPS23P4-201ENST00000487908 423 ntBASIC0.77□□□□□ -2.29
UPK2O00526 AF186996.7-201ENST00000492781 209 ntBASIC0.77□□□□□ -2.29
UPK2O00526 AC010493.1-201ENST00000513479 292 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms