Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.94□□□□□ -2.1
RTCAO00442 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.94□□□□□ -2.1
RTCAO00442 FGF7P4-201ENST00000509595 295 ntBASIC1.94□□□□□ -2.1
RTCAO00442 AP005660.1-201ENST00000522972 293 ntBASIC1.94□□□□□ -2.1
RTCAO00442 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.94□□□□□ -2.1
RTCAO00442 AL121579.1-201ENST00000555129 305 ntBASIC1.94□□□□□ -2.1
RTCAO00442 AC011494.1-201ENST00000596454 237 ntBASIC1.94□□□□□ -2.1
RTCAO00442 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.94□□□□□ -2.1
RTCAO00442 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.94□□□□□ -2.1
RTCAO00442 AC025253.1-201ENST00000613623 543 ntBASIC1.94□□□□□ -2.1
RTCAO00442 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.94□□□□□ -2.1
RTCAO00442 AC005858.4-201ENST00000623191 700 ntBASIC1.94□□□□□ -2.1
RTCAO00442 MTND5P9-201ENST00000503854 1755 ntBASIC1.94□□□□□ -2.1
RTCAO00442 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RTCAO00442 RNU6-595P-201ENST00000363944 107 ntBASIC1.93□□□□□ -2.1
RTCAO00442 RNY3P14-201ENST00000384309 102 ntBASIC1.93□□□□□ -2.1
RTCAO00442 Y_RNA.474-201ENST00000384341 102 ntBASIC1.93□□□□□ -2.1
RTCAO00442 RNU6-306P-201ENST00000384617 107 ntBASIC1.93□□□□□ -2.1
RTCAO00442 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
RTCAO00442 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
RTCAO00442 AC087477.1-201ENST00000465747 340 ntBASIC1.93□□□□□ -2.1
RTCAO00442 TRBV12-1-201ENST00000479785 344 ntBASIC1.93□□□□□ -2.1
RTCAO00442 RPL30P10-201ENST00000488148 337 ntBASIC1.93□□□□□ -2.1
RTCAO00442 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.93□□□□□ -2.1
RTCAO00442 AC105029.1-201ENST00000520250 669 ntBASIC1.93□□□□□ -2.1
RTCAO00442 AC087441.2-201ENST00000529141 262 ntBASIC1.93□□□□□ -2.1
RTCAO00442 CBX3P4-201ENST00000538909 354 ntBASIC1.93□□□□□ -2.1
RTCAO00442 AC026470.2-201ENST00000561492 181 ntBASIC1.93□□□□□ -2.1
RTCAO00442 MIR548S-201ENST00000581352 82 ntBASIC1.93□□□□□ -2.1
RTCAO00442 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.93□□□□□ -2.1
RTCAO00442 AC092794.2-201ENST00000620933 563 ntBASIC1.93□□□□□ -2.1
RTCAO00442 AC130454.1-201ENST00000622948 401 ntBASIC1.93□□□□□ -2.1
RTCAO00442 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.93□□□□□ -2.1
RTCAO00442 ZNF299P-201ENST00000406845 1804 ntBASIC1.93□□□□□ -2.1
RTCAO00442 U8.2-201ENST00000363156 134 ntBASIC1.92□□□□□ -2.1
RTCAO00442 RNU6-743P-201ENST00000364151 106 ntBASIC1.92□□□□□ -2.1
RTCAO00442 MIR208B-201ENST00000401172 77 ntBASIC1.92□□□□□ -2.1
RTCAO00442 RNU2-2P-201ENST00000410396 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
RTCAO00442 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.92□□□□□ -2.1
RTCAO00442 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.92□□□□□ -2.1
RTCAO00442 Y_RNA.708-201ENST00000516950 96 ntBASIC1.92□□□□□ -2.1
RTCAO00442 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.92□□□□□ -2.1
RTCAO00442 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
RTCAO00442 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.92□□□□□ -2.1
RTCAO00442 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.92□□□□□ -2.1
RTCAO00442 U2.15-201ENST00000611544 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.16-201ENST00000613119 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.12-201ENST00000613778 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.20-201ENST00000613956 192 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
RTCAO00442 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
RTCAO00442 AL356292.1-201ENST00000283110 373 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU6-23P-201ENST00000363283 107 ntBASIC1.91□□□□□ -2.1
RTCAO00442 Y_RNA.142-201ENST00000363491 102 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU6-601P-201ENST00000384540 107 ntBASIC1.91□□□□□ -2.1
RTCAO00442 MIR30A-201ENST00000385092 71 ntBASIC1.91□□□□□ -2.1
RTCAO00442 Y_RNA.594-201ENST00000410373 140 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU6-1050P-201ENST00000410388 107 ntBASIC1.91□□□□□ -2.1
RTCAO00442 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RTCAO00442 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.91□□□□□ -2.1
RTCAO00442 MTATP6P23-201ENST00000440153 476 ntBASIC1.91□□□□□ -2.1
RTCAO00442 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.91□□□□□ -2.1
RTCAO00442 MTND5P20-201ENST00000448677 143 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU1-131P-201ENST00000458943 161 ntBASIC1.91□□□□□ -2.1
RTCAO00442 Y_RNA.635-201ENST00000459041 101 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RN7SKP210-201ENST00000459176 261 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
RTCAO00442 RNU6-1198P-201ENST00000516904 67 ntBASIC1.91□□□□□ -2.1
RTCAO00442 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.91□□□□□ -2.1
RTCAO00442 AC109446.1-201ENST00000566172 220 ntBASIC1.91□□□□□ -2.1
RTCAO00442 AC104581.2-201ENST00000572227 430 ntBASIC1.91□□□□□ -2.1
RTCAO00442 MIR5701-3-201ENST00000578890 82 ntBASIC1.91□□□□□ -2.1
RTCAO00442 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
RTCAO00442 MIR4513-201ENST00000581077 86 ntBASIC1.91□□□□□ -2.1
RTCAO00442 AC005730.3-201ENST00000583067 366 ntBASIC1.91□□□□□ -2.1
RTCAO00442 MIR5701-1-201ENST00000585138 82 ntBASIC1.91□□□□□ -2.1
RTCAO00442 AC010928.2-201ENST00000588017 287 ntBASIC1.91□□□□□ -2.1
RTCAO00442 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
RTCAO00442 MIR5701-2-201ENST00000615634 82 ntBASIC1.91□□□□□ -2.1
RTCAO00442 BX322639.1-202ENST00000423987 2213 ntBASIC1.9□□□□□ -2.1
RTCAO00442 RNU6-1059P-201ENST00000363752 98 ntBASIC1.9□□□□□ -2.11
RTCAO00442 SNORA12-201ENST00000391162 147 ntBASIC1.9□□□□□ -2.11
RTCAO00442 Z82205.1-201ENST00000428456 297 ntBASIC1.9□□□□□ -2.11
RTCAO00442 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
RTCAO00442 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.9□□□□□ -2.11
RTCAO00442 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
RTCAO00442 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.9□□□□□ -2.11
RTCAO00442 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.9□□□□□ -2.11
RTCAO00442 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms