Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.65□□□□□ -2.15
SLC28A1O00337 AC079354.2-201ENST00000453523 154 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 AC114982.1-201ENST00000469402 321 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 AC067942.3-201ENST00000512025 362 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.65□□□□□ -2.15
SLC28A1O00337 RNU2-34P-201ENST00000516534 121 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 SNORA44.1-201ENST00000517031 108 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.65□□□□□ -2.15
SLC28A1O00337 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.65□□□□□ -2.15
SLC28A1O00337 AC069114.2-201ENST00000604699 304 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 AC009318.2-201ENST00000610917 651 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
SLC28A1O00337 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SLC28A1O00337 RNU6-112P-201ENST00000363599 104 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 SNORD116-11-201ENST00000383882 92 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 MIR583-201ENST00000384846 75 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 RPS20P15-201ENST00000412792 311 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.64□□□□□ -2.15
SLC28A1O00337 HSPE1P21-201ENST00000438283 308 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 NFU1P2-201ENST00000448700 469 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 AC112492.4-201ENST00000456549 352 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 RNU6-1314P-201ENST00000517139 104 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 RRN3P3-201ENST00000549207 578 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.64□□□□□ -2.15
SLC28A1O00337 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 MIR3942-201ENST00000585264 109 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 AC124303.1-201ENST00000605703 360 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 AC019193.3-201ENST00000609144 554 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 AC100810.6-201ENST00000638068 285 ntBASIC1.64□□□□□ -2.15
SLC28A1O00337 BX322639.1-202ENST00000423987 2213 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 RNU6-661P-201ENST00000362409 107 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 Y_RNA.157-201ENST00000363638 102 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 RNU4-9P-201ENST00000364951 139 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 Y_RNA.453-201ENST00000384223 109 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 U8.10-201ENST00000384260 133 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 MIR30A-201ENST00000385092 71 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 SNORA40.18-201ENST00000391200 128 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 AC074290.1-201ENST00000448883 135 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 RPL23AP94-201ENST00000512518 302 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 Y_RNA.655-201ENST00000515919 96 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.63□□□□□ -2.15
SLC28A1O00337 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.63□□□□□ -2.15
SLC28A1O00337 SNORA59B-202ENST00000578183 701 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 AC013412.1-201ENST00000610687 192 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 MIR3662-201ENST00000637030 95 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 ZNF204P-201ENST00000416749 2397 ntBASIC1.63□□□□□ -2.15
SLC28A1O00337 SNORD114-1-201ENST00000362705 72 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 RNU6-862P-201ENST00000362804 105 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SLC28A1O00337 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 SNORD115-47-201ENST00000391226 86 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 AC004866.1-201ENST00000411748 78 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 AC099677.2-201ENST00000436385 175 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 MTND1P34-201ENST00000438556 671 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 HMGN2P23-201ENST00000456759 269 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 HMGN2P9-201ENST00000476875 229 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 RNU6-1041P-201ENST00000516254 102 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 RNU6-948P-201ENST00000516374 107 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 RNU6-273P-201ENST00000516937 96 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 RNA5SP54-201ENST00000516951 92 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
SLC28A1O00337 AP003465.2-201ENST00000602571 373 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 AC006504.8-201ENST00000621046 635 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 MIR3688-2-201ENST00000636963 87 ntBASIC1.62□□□□□ -2.15
SLC28A1O00337 SNORD115-32-201ENST00000364079 82 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 RNU1-96P-201ENST00000364163 162 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 RNU6-1305P-201ENST00000364353 104 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 RNA5SP126-201ENST00000365092 109 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 RNU6-1013P-201ENST00000384180 107 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 RNU6-439P-201ENST00000384188 106 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 RNU6-975P-201ENST00000384296 105 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 MIR32-201ENST00000384965 70 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 MIR487A-201ENST00000385009 80 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 MIR586-201ENST00000385035 97 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 AC060773.1-201ENST00000421698 310 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 MTND4LP16-201ENST00000440828 295 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.61□□□□□ -2.15
SLC28A1O00337 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
SLC28A1O00337 AC011406.1-201ENST00000512440 370 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 RNU6-864P-201ENST00000516256 108 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
SLC28A1O00337 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.61□□□□□ -2.15
SLC28A1O00337 DEFB122-202ENST00000569013 197 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 AC090517.2-201ENST00000614966 680 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.61□□□□□ -2.15
SLC28A1O00337 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.61□□□□□ -2.15
SLC28A1O00337 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.6□□□□□ -2.15
SLC28A1O00337 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 RNU6-306P-201ENST00000384617 107 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 MIR520A-201ENST00000384862 85 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SLC28A1O00337 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.6□□□□□ -2.15
SLC28A1O00337 Z82188.1-201ENST00000436709 154 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 AC016717.1-201ENST00000448918 286 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms