Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNA5SP291-201ENST00000517222 105 ntBASIC3.42□□□□□ -1.86
RFXAPO00287 MIR4744-201ENST00000581563 82 ntBASIC3.42□□□□□ -1.86
RFXAPO00287 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
RFXAPO00287 SNRPGP15-201ENST00000600149 222 ntBASIC3.42□□□□□ -1.86
RFXAPO00287 AL138963.2-201ENST00000605137 226 ntBASIC3.42□□□□□ -1.86
RFXAPO00287 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.42□□□□□ -1.86
RFXAPO00287 AF127577.6-201ENST00000623352 2191 ntBASIC3.42□□□□□ -1.86
RFXAPO00287 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RFXAPO00287 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RFXAPO00287 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RFXAPO00287 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFXAPO00287 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.41□□□□□ -1.86
RFXAPO00287 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFXAPO00287 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFXAPO00287 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFXAPO00287 Y_RNA.179-201ENST00000363844 90 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 RNU6-454P-201ENST00000364292 107 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 SNORA71.1-201ENST00000364523 117 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.41□□□□□ -1.86
RFXAPO00287 HMGN2P7-201ENST00000456186 273 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 AC107027.2-201ENST00000512197 115 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 RNU6-436P-201ENST00000516171 114 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 SNORA70.14-201ENST00000516205 110 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 AC016256.1-201ENST00000547971 354 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 MIR4319-201ENST00000577285 85 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 MIR3529-201ENST00000637713 78 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 ZNF702P-202ENST00000434269 1966 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 AC068647.1-201ENST00000489539 2265 ntBASIC3.41□□□□□ -1.86
RFXAPO00287 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFXAPO00287 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFXAPO00287 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
RFXAPO00287 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.41□□□□□ -1.86
RFXAPO00287 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RFXAPO00287 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.4□□□□□ -1.86
RFXAPO00287 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RFXAPO00287 RNU6-1255P-201ENST00000363434 112 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 SNORA7.4-201ENST00000384249 137 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 AC096649.2-201ENST00000416186 393 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.4□□□□□ -1.87
RFXAPO00287 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.4□□□□□ -1.87
RFXAPO00287 AL135938.1-201ENST00000443141 297 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 AC009237.8-201ENST00000445492 379 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 EEF1B2P7-201ENST00000451177 676 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.4□□□□□ -1.87
RFXAPO00287 AC092991.1-201ENST00000477176 376 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 AC016632.1-201ENST00000503994 196 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFXAPO00287 RNU2-12P-201ENST00000517216 168 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.4□□□□□ -1.87
RFXAPO00287 AC109810.1-201ENST00000534066 224 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.4□□□□□ -1.87
RFXAPO00287 AP002826.1-201ENST00000608835 315 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.4□□□□□ -1.87
RFXAPO00287 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFXAPO00287 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFXAPO00287 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RFXAPO00287 RNU6-1141P-201ENST00000364520 107 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 U3.40-201ENST00000408706 208 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 AC006461.1-201ENST00000412637 326 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 CYCSP49-201ENST00000420810 319 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 AL139132.1-201ENST00000431587 344 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RFXAPO00287 TRBV12-1-201ENST00000479785 344 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 CYCTP-201ENST00000504253 315 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 RNU6-561P-201ENST00000516222 102 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 RNA5SP170-201ENST00000517150 101 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 AC091544.4-201ENST00000555268 342 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 AC009127.3-201ENST00000570531 403 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 MIR3674-201ENST00000636576 68 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFXAPO00287 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.39□□□□□ -1.87
RFXAPO00287 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RFXAPO00287 MTND5P32-201ENST00000560711 1802 ntBASIC3.39□□□□□ -1.87
RFXAPO00287 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFXAPO00287 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RFXAPO00287 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFXAPO00287 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
RFXAPO00287 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFXAPO00287 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.38□□□□□ -1.87
RFXAPO00287 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFXAPO00287 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.38□□□□□ -1.87
RFXAPO00287 AC000403.1-201ENST00000613696 3585 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RNU6-324P-201ENST00000363957 106 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RNU6-407P-201ENST00000365280 104 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RNU6-793P-201ENST00000384233 104 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 SNORA40.19-201ENST00000390846 128 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RN7SKP61-201ENST00000410642 295 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 AC092047.1-201ENST00000424997 240 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.38□□□□□ -1.87
RFXAPO00287 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.38□□□□□ -1.87
RFXAPO00287 AC245047.8-201ENST00000456455 284 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RPS29P20-201ENST00000489592 171 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RN7SKP164-201ENST00000516138 266 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RNA5SP367-201ENST00000516557 118 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 RNU6-1007P-201ENST00000516586 107 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 AL391813.1-201ENST00000603098 260 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 FTX_3.1-201ENST00000610451 147 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 AC011603.4-201ENST00000611325 277 ntBASIC3.38□□□□□ -1.87
RFXAPO00287 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms