Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AL158209.2-201ENST00000619266 216 ntBASIC1.64□□□□□ -2.15
DDX39AO00148 MTND5P26-201ENST00000426018 1752 ntBASIC1.64□□□□□ -2.15
DDX39AO00148 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
DDX39AO00148 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
DDX39AO00148 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
DDX39AO00148 MIR514A2-201ENST00000385131 88 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 MIR514A3-201ENST00000385132 88 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 RNU6-325P-201ENST00000411132 105 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 C8orf59P1-201ENST00000429930 303 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 MTCO3P29-201ENST00000432119 779 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 AC069257.2-201ENST00000441819 155 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.63□□□□□ -2.15
DDX39AO00148 MTCO1P29-201ENST00000496868 288 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 AC011406.1-201ENST00000512440 370 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.63□□□□□ -2.15
DDX39AO00148 RNU6-835P-201ENST00000516974 104 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.63□□□□□ -2.15
DDX39AO00148 MIR4498-201ENST00000577599 66 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 MIR3976-201ENST00000606807 139 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.63□□□□□ -2.15
DDX39AO00148 AC068792.1-201ENST00000621354 417 ntBASIC1.63□□□□□ -2.15
DDX39AO00148 ZNF209P-201ENST00000593450 2304 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 RNU6-648P-201ENST00000410190 107 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.62□□□□□ -2.15
DDX39AO00148 CST2P1-201ENST00000425770 87 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 Z82205.1-201ENST00000428456 297 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.62□□□□□ -2.15
DDX39AO00148 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.62□□□□□ -2.15
DDX39AO00148 MRPS36P4-201ENST00000534436 298 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 AC084364.2-201ENST00000546924 395 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 AL161670.1-201ENST00000554348 137 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 AC010620.1-201ENST00000601088 1102 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 AP000907.4-201ENST00000604143 237 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 AL353149.1-201ENST00000610667 244 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 MIR8076-201ENST00000611401 83 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 RMST_3.1-201ENST00000611651 109 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 AC097520.1-201ENST00000624435 385 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.62□□□□□ -2.15
DDX39AO00148 AC100821.1-201ENST00000523153 2479 ntBASIC1.62□□□□□ -2.15
DDX39AO00148 BX322639.1-202ENST00000423987 2213 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 RNU6-259P-201ENST00000383999 107 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 MIR521-1-201ENST00000384902 87 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AL117342.1-201ENST00000404861 406 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AC060773.1-201ENST00000421698 310 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AC009237.7-201ENST00000447357 229 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AC009474.2-201ENST00000451383 136 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AC092436.3-201ENST00000511788 257 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 RNU6-1332P-201ENST00000516666 104 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.61□□□□□ -2.15
DDX39AO00148 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.61□□□□□ -2.15
DDX39AO00148 AC100830.2-201ENST00000581636 240 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AC146944.4-201ENST00000602697 718 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AC022079.1-201ENST00000621546 602 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 MIR8063-201ENST00000621930 81 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 OR5AK4P-201ENST00000635912 903 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 ICE2P2-201ENST00000483823 2787 ntBASIC1.61□□□□□ -2.15
DDX39AO00148 AC121333.1-201ENST00000567488 2709 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
DDX39AO00148 Y_RNA.231-201ENST00000364358 102 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 SNORA63D-201ENST00000364359 132 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 RNU6-1235P-201ENST00000384559 107 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 MTCO3P40-201ENST00000392516 676 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.6□□□□□ -2.15
DDX39AO00148 MIR320B2-201ENST00000408479 138 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 RN7SKP51-201ENST00000410781 304 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 AC245517.4-201ENST00000448601 281 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 AC074290.1-201ENST00000448883 135 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 OR2AQ1P-201ENST00000451972 200 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 RNU6-498P-201ENST00000459468 107 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.6□□□□□ -2.15
DDX39AO00148 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 RNA5SP445-201ENST00000515889 115 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 RNU6-948P-201ENST00000516374 107 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 RNA5SP384-201ENST00000516615 116 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.6□□□□□ -2.15
DDX39AO00148 MIR4421-201ENST00000578133 69 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 AP001485.1-201ENST00000604799 199 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 AC126177.8-201ENST00000618339 1015 ntBASIC1.6□□□□□ -2.15
DDX39AO00148 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
DDX39AO00148 MTND4P5-201ENST00000435821 1374 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 RNU6-271P-201ENST00000363858 105 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.15
DDX39AO00148 MIR548B-201ENST00000385247 97 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 RNU2-66P-201ENST00000410650 161 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 SNRPEP10-201ENST00000420249 274 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.59□□□□□ -2.15
DDX39AO00148 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.59□□□□□ -2.15
DDX39AO00148 NFU1P2-201ENST00000448700 469 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 HMGN2P9-201ENST00000476875 229 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 AF186996.7-201ENST00000492781 209 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 RRN3P3-201ENST00000549207 578 ntBASIC1.59□□□□□ -2.15
DDX39AO00148 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.59□□□□□ -2.15
DDX39AO00148 SUB1P3-201ENST00000564581 315 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms