Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 U2.21-201ENST00000637295 81 ntBASIC4.12□□□□□ -1.75
H3BM21 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3BM21 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
H3BM21 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
H3BM21 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
H3BM21 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.11□□□□□ -1.75
H3BM21 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
H3BM21 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.11□□□□□ -1.75
H3BM21 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
H3BM21 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3BM21 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3BM21 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
H3BM21 RNU6-335P-201ENST00000364563 113 ntBASIC4.11□□□□□ -1.75
H3BM21 RNU6-629P-201ENST00000384061 103 ntBASIC4.11□□□□□ -1.75
H3BM21 MIR548B-201ENST00000385247 97 ntBASIC4.11□□□□□ -1.75
H3BM21 MIR759-201ENST00000390224 91 ntBASIC4.11□□□□□ -1.75
H3BM21 RNA5SP390-201ENST00000410191 113 ntBASIC4.11□□□□□ -1.75
H3BM21 RNU6-402P-201ENST00000410678 103 ntBASIC4.11□□□□□ -1.75
H3BM21 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.11□□□□□ -1.75
H3BM21 AC023449.1-201ENST00000454464 154 ntBASIC4.11□□□□□ -1.75
H3BM21 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.11□□□□□ -1.75
H3BM21 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.11□□□□□ -1.75
H3BM21 AC022655.2-201ENST00000577280 318 ntBASIC4.11□□□□□ -1.75
H3BM21 SNRPGP15-201ENST00000600149 222 ntBASIC4.11□□□□□ -1.75
H3BM21 MIR7702-201ENST00000621931 59 ntBASIC4.11□□□□□ -1.75
H3BM21 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.11□□□□□ -1.75
H3BM21 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
H3BM21 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.11□□□□□ -1.75
H3BM21 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3BM21 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.1□□□□□ -1.75
H3BM21 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
H3BM21 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3BM21 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.1□□□□□ -1.75
H3BM21 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.1□□□□□ -1.75
H3BM21 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3BM21 RNU6-778P-201ENST00000363269 103 ntBASIC4.1□□□□□ -1.75
H3BM21 SNORA67.2-201ENST00000384300 149 ntBASIC4.1□□□□□ -1.75
H3BM21 MIR93-201ENST00000385024 80 ntBASIC4.1□□□□□ -1.75
H3BM21 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.1□□□□□ -1.75
H3BM21 MIR889-201ENST00000401280 79 ntBASIC4.1□□□□□ -1.75
H3BM21 HLA-N-201ENST00000437516 135 ntBASIC4.1□□□□□ -1.75
H3BM21 RPL37P4-201ENST00000448908 268 ntBASIC4.1□□□□□ -1.75
H3BM21 AIG1P1-201ENST00000503376 148 ntBASIC4.1□□□□□ -1.75
H3BM21 RNU6-162P-201ENST00000516228 103 ntBASIC4.1□□□□□ -1.75
H3BM21 SNORA31.20-201ENST00000517111 133 ntBASIC4.1□□□□□ -1.75
H3BM21 AC069240.1-201ENST00000548774 375 ntBASIC4.1□□□□□ -1.75
H3BM21 CYP4A43P-201ENST00000568156 121 ntBASIC4.1□□□□□ -1.75
H3BM21 RPL23AP91-201ENST00000569211 455 ntBASIC4.1□□□□□ -1.75
H3BM21 U7.3-201ENST00000616123 62 ntBASIC4.1□□□□□ -1.75
H3BM21 AC002064.3-201ENST00000623448 346 ntBASIC4.1□□□□□ -1.75
H3BM21 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
H3BM21 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3BM21 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.1□□□□□ -1.75
H3BM21 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3BM21 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.09□□□□□ -1.75
H3BM21 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
H3BM21 SNORA60-201ENST00000362396 134 ntBASIC4.09□□□□□ -1.75
H3BM21 Y_RNA.66-201ENST00000362862 102 ntBASIC4.09□□□□□ -1.75
H3BM21 SNORD115-13-201ENST00000363358 82 ntBASIC4.09□□□□□ -1.75
H3BM21 SNORD115-16-201ENST00000363887 82 ntBASIC4.09□□□□□ -1.75
H3BM21 SNORD115-1-201ENST00000364961 82 ntBASIC4.09□□□□□ -1.75
H3BM21 SNORA18.2-201ENST00000383865 132 ntBASIC4.09□□□□□ -1.75
H3BM21 RNU6-622P-201ENST00000384272 103 ntBASIC4.09□□□□□ -1.75
H3BM21 U8.12-201ENST00000384701 133 ntBASIC4.09□□□□□ -1.75
H3BM21 AL451046.2-201ENST00000403074 277 ntBASIC4.09□□□□□ -1.75
H3BM21 NDUFB1P1-201ENST00000435191 180 ntBASIC4.09□□□□□ -1.75
H3BM21 RPL39P25-201ENST00000449384 154 ntBASIC4.09□□□□□ -1.75
H3BM21 AC097462.1-201ENST00000514125 324 ntBASIC4.09□□□□□ -1.75
H3BM21 RNY4P20-201ENST00000516678 93 ntBASIC4.09□□□□□ -1.75
H3BM21 RNU6-1149P-201ENST00000516810 97 ntBASIC4.09□□□□□ -1.75
H3BM21 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.09□□□□□ -1.75
H3BM21 AL451007.1-201ENST00000595491 289 ntBASIC4.09□□□□□ -1.75
H3BM21 PCGEM1.1-201ENST00000613431 131 ntBASIC4.09□□□□□ -1.75
H3BM21 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.09□□□□□ -1.75
H3BM21 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.09□□□□□ -1.75
H3BM21 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
H3BM21 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
H3BM21 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
H3BM21 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.09□□□□□ -1.76
H3BM21 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.09□□□□□ -1.76
H3BM21 AC004925.1-201ENST00000624256 2706 ntBASIC4.08□□□□□ -1.76
H3BM21 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.08□□□□□ -1.76
H3BM21 SNORA62.3-201ENST00000365110 153 ntBASIC4.08□□□□□ -1.76
H3BM21 RNU6-1280P-201ENST00000365211 107 ntBASIC4.08□□□□□ -1.76
H3BM21 RNU1-73P-201ENST00000383971 164 ntBASIC4.08□□□□□ -1.76
H3BM21 SNORA1-201ENST00000384107 130 ntBASIC4.08□□□□□ -1.76
H3BM21 MT-TI-201ENST00000387365 69 ntBASIC4.08□□□□□ -1.76
H3BM21 RNA5SP171-201ENST00000391071 115 ntBASIC4.08□□□□□ -1.76
H3BM21 AC004552.1-201ENST00000419089 348 ntBASIC4.08□□□□□ -1.76
H3BM21 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
H3BM21 AL121890.1-201ENST00000435457 205 ntBASIC4.08□□□□□ -1.76
H3BM21 snoU13.22-201ENST00000459428 104 ntBASIC4.08□□□□□ -1.76
H3BM21 RPS26P3-201ENST00000470205 348 ntBASIC4.08□□□□□ -1.76
H3BM21 AC090543.2-201ENST00000483963 348 ntBASIC4.08□□□□□ -1.76
H3BM21 AC004057.1-201ENST00000485827 348 ntBASIC4.08□□□□□ -1.76
H3BM21 RNU6-240P-201ENST00000516098 97 ntBASIC4.08□□□□□ -1.76
H3BM21 AC023632.4-201ENST00000517783 191 ntBASIC4.08□□□□□ -1.76
H3BM21 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
H3BM21 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
H3BM21 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms