Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU6-842P-201ENST00000384269 107 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 RNA5SP465-201ENST00000391195 109 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 AC074085.1-201ENST00000413598 418 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 RPL31P58-201ENST00000469001 379 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 AC046134.1-201ENST00000514454 666 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 AC026470.2-201ENST00000561492 181 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 SNRPGP20-201ENST00000604477 205 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 TCL6_2.1-201ENST00000615162 119 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 RNU6-845P-201ENST00000362578 103 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 Y_RNA.132-201ENST00000363421 102 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 MIR548K-201ENST00000408406 116 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 RNU6-174P-201ENST00000410406 106 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC107399.1-201ENST00000451226 265 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 PMCHL2-203ENST00000457791 237 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 snoU13.30-201ENST00000458951 104 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC007215.1-201ENST00000464893 276 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 RNU6-548P-201ENST00000517083 115 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC087441.2-201ENST00000529141 262 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 MIR5696-201ENST00000578474 85 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 7SK.7-201ENST00000603504 247 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 CYP2C61P-201ENST00000604072 290 ntBASIC1.84□□□□□ -2.11
NPIPA3F8WFD2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 Y_RNA.279-201ENST00000364763 95 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 RNU6-596P-201ENST00000365395 98 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 AC019129.1-201ENST00000403786 261 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 AL512604.1-201ENST00000404812 257 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 AL445305.1-201ENST00000432577 575 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 AL021397.1-201ENST00000451806 248 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 SNORD5.1-201ENST00000458800 75 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 RPL30P10-201ENST00000488148 337 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 RNU6-295P-201ENST00000516901 104 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 MIR3169-201ENST00000578032 83 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 RMST_6.1-201ENST00000611980 203 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 AC009487.4-201ENST00000624969 3585 ntBASIC1.83□□□□□ -2.12
NPIPA3F8WFD2 AC008555.8-201ENST00000623602 2168 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 MIR340-201ENST00000362125 95 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 Y_RNA.2-201ENST00000362330 96 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 Y_RNA.184-201ENST00000363884 108 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RNA5SP99-201ENST00000364020 114 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RNU6-418P-201ENST00000384035 107 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RNU6-541P-201ENST00000384709 110 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 MIR320B2-201ENST00000408479 138 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RNU2-2P-201ENST00000410396 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AC004866.1-201ENST00000411748 78 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AL139156.1-201ENST00000412785 841 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RPL37P10-201ENST00000412884 288 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RPL21P111-201ENST00000418453 477 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 WARS2P1-201ENST00000429678 537 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 HMGB1P18-201ENST00000438801 619 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RPL23AP3-201ENST00000453844 468 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AC016925.1-201ENST00000458303 298 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 Y_RNA.638-201ENST00000459374 113 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AC026782.1-201ENST00000512952 449 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 MIR5002-201ENST00000584713 97 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 AC018462.2-201ENST00000605375 395 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.15-201ENST00000611544 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.16-201ENST00000613119 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.12-201ENST00000613778 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.20-201ENST00000613956 192 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.9-201ENST00000615427 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.11-201ENST00000616345 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.2-201ENST00000616535 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.3-201ENST00000617785 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.19-201ENST00000618602 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 RNU2-1-201ENST00000618664 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.6-201ENST00000619225 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.5-201ENST00000619465 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 U2.10-201ENST00000620268 191 ntBASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
NPIPA3F8WFD2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NPIPA3F8WFD2 BX322639.1-202ENST00000423987 2213 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms