Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RMST_6.1-201ENST00000611980 203 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC040896.1-201ENST00000613819 479 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC005336.3-201ENST00000623833 2679 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SRRM4A7MD48 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SRRM4A7MD48 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 RNU4-9P-201ENST00000364951 139 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 RNU6-438P-201ENST00000365561 103 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 SNORA22B-201ENST00000383876 138 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 RNU6-378P-201ENST00000384324 107 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 OR2AQ1P-201ENST00000451972 200 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 SNORA59A-201ENST00000459326 152 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 HMGN1P10-201ENST00000474557 553 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 RPS23P5-201ENST00000495419 428 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 RN7SL636P-201ENST00000497504 294 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC093259.1-201ENST00000509755 300 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 RNU5F-4P-201ENST00000516581 114 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.85□□□□□ -2.11
SRRM4A7MD48 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC121758.2-201ENST00000553271 193 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 MIR5007-201ENST00000583098 95 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC006023.1-201ENST00000603944 259 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 SNRPGP20-201ENST00000604477 205 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 SCARNA4-201ENST00000629045 128 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 MIR1248-201ENST00000629190 106 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 AC243829.7-201ENST00000633081 225 ntBASIC1.85□□□□□ -2.11
SRRM4A7MD48 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SRRM4A7MD48 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.85□□□□□ -2.11
SRRM4A7MD48 ZNF720P1-201ENST00000562403 1939 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 Y_RNA.5-201ENST00000362334 102 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 Y_RNA.112-201ENST00000363250 102 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 SNORA33.2-201ENST00000365413 134 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 Y_RNA.463-201ENST00000384271 102 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 RNU6-1026P-201ENST00000384465 108 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 MIR606-201ENST00000384851 96 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 AL355497.1-201ENST00000406262 551 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 RNU6-174P-201ENST00000410406 106 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 AC243428.1-201ENST00000421099 264 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 MTND2P23-201ENST00000422990 651 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 AC022493.2-201ENST00000506122 481 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 RNU6-976P-201ENST00000516086 111 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 RNA5SP54-201ENST00000516951 92 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 MRPS36P4-201ENST00000534436 298 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 AC090517.1-201ENST00000569307 266 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 MIR4513-201ENST00000581077 86 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 AC016925.2-201ENST00000605108 242 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.84□□□□□ -2.11
SRRM4A7MD48 MIR6766-201ENST00000622641 72 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 CTSLP2-204ENST00000629029 392 ntBASIC1.84□□□□□ -2.11
SRRM4A7MD48 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
SRRM4A7MD48 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SRRM4A7MD48 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
SRRM4A7MD48 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU1-76P-201ENST00000362903 159 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 Y_RNA.148-201ENST00000363557 117 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU6-137P-201ENST00000363680 108 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 SNORD115-32-201ENST00000364079 82 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 Y_RNA.202-201ENST00000364083 110 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU6-743P-201ENST00000364151 106 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 SNORA36A-201ENST00000384221 132 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU6-160P-201ENST00000384591 107 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 SNORA12-201ENST00000391162 147 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 MIR300-201ENST00000401138 83 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RPL23AP50-201ENST00000434149 455 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 AC007215.1-201ENST00000464893 276 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 AC055731.1-201ENST00000474387 401 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 FO393415.2-201ENST00000480085 343 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU6-470P-201ENST00000515954 104 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 Y_RNA.661-201ENST00000516003 99 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU6-327P-201ENST00000516270 127 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU6-307P-201ENST00000516743 106 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU6-699P-201ENST00000517081 110 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RN7SKP295-201ENST00000517264 153 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 MYL12BP1-201ENST00000569826 507 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 MIR3162-201ENST00000581818 82 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 MIR4273-201ENST00000582824 84 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 AC005899.2-201ENST00000584353 90 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 AC006504.6-201ENST00000590142 199 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.83□□□□□ -2.12
SRRM4A7MD48 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.83□□□□□ -2.12
SRRM4A7MD48 AC130454.1-201ENST00000622948 401 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms