Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 VN1R10P-201ENST00000447106 875 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AC007327.1-201ENST00000447461 264 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AC015911.1-201ENST00000495111 156 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 7SK.7-201ENST00000603504 247 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 BX322639.1-202ENST00000423987 2213 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 RNU6-582P-201ENST00000362989 107 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 SNORA2B-201ENST00000384583 137 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 RNU2-28P-201ENST00000410457 189 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 MTND1P21-201ENST00000412991 285 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 Z95118.1-201ENST00000421372 247 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 MTCO1P20-201ENST00000425366 358 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 RPL39P34-201ENST00000477141 156 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 MIR3681-201ENST00000580089 72 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 AC100830.2-201ENST00000581636 240 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 MIR4436A-201ENST00000585278 85 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 AC016252.1-201ENST00000609721 474 ntBASIC-1.37□□□□□ -2.63
LINC01549A6NIU2 RNU6-187P-201ENST00000384139 106 ntBASIC-1.38□□□□□ -2.63
LINC01549A6NIU2 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.38□□□□□ -2.63
LINC01549A6NIU2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-1.38□□□□□ -2.63
LINC01549A6NIU2 AL163973.1-201ENST00000484753 577 ntBASIC-1.38□□□□□ -2.63
LINC01549A6NIU2 RNU6-758P-201ENST00000516292 89 ntBASIC-1.38□□□□□ -2.63
LINC01549A6NIU2 AP001328.1-201ENST00000528550 176 ntBASIC-1.38□□□□□ -2.63
LINC01549A6NIU2 SGO1P1-201ENST00000603525 1447 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 AP000568.1-201ENST00000282964 442 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 Y_RNA.132-201ENST00000363421 102 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 MIR16-1-201ENST00000385271 89 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 RNU4-63P-201ENST00000411313 118 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 HSFY5P-201ENST00000453726 309 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 AL122001.1-201ENST00000457027 370 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 RNU7-14P-201ENST00000459331 62 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 AP000870.1-201ENST00000472927 406 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 SNORA31.3-201ENST00000516029 96 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 AC068790.2-201ENST00000602601 557 ntBASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.39□□□□□ -2.63
LINC01549A6NIU2 snoZ40.1-201ENST00000364540 72 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 SNORD116-20-201ENST00000384529 92 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 DEFB130D-201ENST00000426866 237 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 AC004854.1-201ENST00000440356 349 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 AC007000.2-201ENST00000442564 487 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 NAMPTP3-201ENST00000569273 224 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 AL512643.1-201ENST00000635735 524 ntBASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-1.4□□□□□ -2.63
LINC01549A6NIU2 DBF4P1-201ENST00000412976 1892 ntBASIC-1.41□□□□□ -2.63
LINC01549A6NIU2 RNU6-359P-201ENST00000365466 108 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 SNORA3B-201ENST00000391305 131 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 MRPL42P3-201ENST00000401492 326 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 MTCO2P31-201ENST00000402702 684 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AL079342.2-201ENST00000403367 482 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 RNU6-575P-201ENST00000411326 105 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AL354692.1-201ENST00000423044 315 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AC007283.2-201ENST00000424739 197 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AC245047.3-201ENST00000429428 127 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AL139824.2-201ENST00000458731 1095 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AC026410.2-201ENST00000460281 156 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AC048346.1-201ENST00000510247 144 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 RNU2-34P-201ENST00000516534 121 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AP002453.2-201ENST00000533503 320 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AC023538.1-201ENST00000534576 736 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 AC108676.2-201ENST00000605225 163 ntBASIC-1.41□□□□□ -2.64
LINC01549A6NIU2 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AL139421.1-201ENST00000423010 169 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AL929288.2-201ENST00000446368 407 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AC116562.3-201ENST00000506136 177 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 RNU6-143P-201ENST00000516942 93 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 LRRC34P1-201ENST00000542742 915 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 CR383656.4-201ENST00000546909 122 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AC095057.3-201ENST00000567102 1157 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AC004584.2-201ENST00000570407 410 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AC087685.1-201ENST00000587507 141 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AC078795.3-201ENST00000602913 472 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 AC106754.1-201ENST00000562632 1513 ntBASIC-1.42□□□□□ -2.64
LINC01549A6NIU2 MIR148A-201ENST00000362215 68 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 SNORA26-201ENST00000391286 122 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 AL049545.1-201ENST00000401856 572 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 TMSB4XP6-201ENST00000415187 135 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 snoU13.8-201ENST00000458890 104 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 AL391840.1-201ENST00000571144 367 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms