Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.37□□□□□ -2.19
CLRN2A0PK11 AC090821.2-201ENST00000523552 176 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 MTND4P7-201ENST00000523876 130 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 MTCO3P23-201ENST00000561363 289 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 AC009994.1-201ENST00000606889 253 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 AL355802.3-201ENST00000607571 545 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 uc_338.34-201ENST00000617467 174 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 AL354950.2-201ENST00000617939 290 ntBASIC1.37□□□□□ -2.19
CLRN2A0PK11 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 RNU6-996P-201ENST00000365438 107 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 RNU6-418P-201ENST00000384035 107 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 SNORD37.1-201ENST00000390968 65 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 AL606923.1-201ENST00000406616 190 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.36□□□□□ -2.19
CLRN2A0PK11 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.36□□□□□ -2.19
CLRN2A0PK11 OR2AQ1P-201ENST00000451972 200 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.36□□□□□ -2.19
CLRN2A0PK11 HMGN2P9-201ENST00000476875 229 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.36□□□□□ -2.19
CLRN2A0PK11 AC005520.5-201ENST00000613926 164 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 AC023510.2-201ENST00000622162 746 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 SNORA43.4-201ENST00000629559 138 ntBASIC1.36□□□□□ -2.19
CLRN2A0PK11 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.36□□□□□ -2.19
CLRN2A0PK11 Y_RNA.36-201ENST00000362602 112 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 SNORA63D-201ENST00000364359 132 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 Y_RNA.381-201ENST00000365666 102 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 RNU6-331P-201ENST00000384724 107 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 AL161935.2-201ENST00000414627 60 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 AL031667.1-201ENST00000440222 725 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 MTCO2P3-201ENST00000442543 421 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 RNU7-138P-201ENST00000459479 64 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 RPL31P58-201ENST00000469001 379 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 AC092991.1-201ENST00000477176 376 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.35□□□□□ -2.19
CLRN2A0PK11 AP005597.4-201ENST00000526762 229 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.35□□□□□ -2.19
CLRN2A0PK11 AC109347.2-201ENST00000610220 349 ntBASIC1.35□□□□□ -2.19
CLRN2A0PK11 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.35□□□□□ -2.19
CLRN2A0PK11 Y_RNA.159-201ENST00000363674 87 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
CLRN2A0PK11 EIF1P1-201ENST00000421436 341 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.34□□□□□ -2.19
CLRN2A0PK11 MTND3P9-201ENST00000429526 346 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 snoU13.27-201ENST00000459278 104 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 RNU6-1037P-201ENST00000459571 107 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 RPS23P4-201ENST00000487908 423 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 RNU6-612P-201ENST00000516909 102 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 RNU6-856P-201ENST00000516959 98 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 MTCO2P4-201ENST00000517968 247 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 RNU6-323P-201ENST00000521915 107 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 RAB11AP2-201ENST00000545905 639 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 AC015688.6-201ENST00000577737 104 ntBASIC1.34□□□□□ -2.19
CLRN2A0PK11 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.34□□□□□ -2.19
CLRN2A0PK11 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLRN2A0PK11 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLRN2A0PK11 RNA5SP325-201ENST00000363756 130 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 AC073464.1-201ENST00000429823 534 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.33□□□□□ -2.2
CLRN2A0PK11 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.33□□□□□ -2.2
CLRN2A0PK11 RNU7-180P-201ENST00000459240 63 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 Y_RNA.717-201ENST00000517106 92 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.33□□□□□ -2.2
CLRN2A0PK11 MIR4528-201ENST00000577763 90 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 MIR4753-201ENST00000585119 83 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 NIFKP6-201ENST00000598115 845 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 AC008147.4-201ENST00000617570 1204 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.33□□□□□ -2.2
CLRN2A0PK11 MIR300-201ENST00000401138 83 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 COX6CP10-201ENST00000416832 224 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.32□□□□□ -2.2
CLRN2A0PK11 CST2P1-201ENST00000425770 87 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 USP9YP29-201ENST00000445112 563 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.32□□□□□ -2.2
CLRN2A0PK11 Y_RNA.695-201ENST00000516715 107 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.32□□□□□ -2.2
CLRN2A0PK11 MIR5006-201ENST00000583027 110 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.32□□□□□ -2.2
CLRN2A0PK11 AP003465.2-201ENST00000602571 373 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 AC073648.5-201ENST00000603502 305 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 AC126177.8-201ENST00000618339 1015 ntBASIC1.32□□□□□ -2.2
CLRN2A0PK11 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLRN2A0PK11 RNU6-562P-201ENST00000362731 107 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 RNU6-348P-201ENST00000384386 107 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 AC073415.1-201ENST00000449240 153 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 AL163195.1-201ENST00000496941 348 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 AC067942.3-201ENST00000512025 362 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 AC011406.1-201ENST00000512440 370 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 RNA5SP436-201ENST00000516020 115 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 RNU6-1038P-201ENST00000516516 104 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 RNU2-34P-201ENST00000516534 121 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 RNA5SP384-201ENST00000516615 116 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 RNU6-113P-201ENST00000516653 101 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 AC104576.1-201ENST00000524225 88 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.31□□□□□ -2.2
CLRN2A0PK11 AC090115.3-201ENST00000553218 849 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 AC016727.2-201ENST00000603988 621 ntBASIC1.31□□□□□ -2.2
CLRN2A0PK11 CTHRC1P1-201ENST00000605383 469 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms