Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HMGB1P29-201ENST00000505659 499 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MTND2P31-201ENST00000512602 616 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LRRC34P2-201ENST00000514850 553 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-567P-201ENST00000516746 107 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AP003168.1-201ENST00000530091 307 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MIR4753-201ENST00000585119 83 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC104010.1-201ENST00000616889 150 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL513423.1-201ENST00000621695 132 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC008133.2-201ENST00000624540 351 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC121333.1-201ENST00000567488 2709 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU4-92P-201ENST00000363783 136 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU4-76P-201ENST00000364509 141 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-975P-201ENST00000384296 105 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR653-201ENST00000385279 96 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-1242P-201ENST00000391052 103 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL031577.2-201ENST00000404133 280 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-387P-201ENST00000411331 105 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RPS27AP14-201ENST00000422868 454 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RPL37P21-201ENST00000435890 276 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RPEP5-201ENST00000441137 268 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-947P-201ENST00000516264 106 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-948P-201ENST00000516374 107 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC018659.1-201ENST00000551083 169 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL121992.2-201ENST00000606262 256 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC064807.4-201ENST00000607201 407 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL139418.1-201ENST00000613613 177 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC008250.2-201ENST00000615261 205 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR8054-201ENST00000620877 86 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC006001.4-201ENST00000622243 395 ntBASIC0.27□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-179P-201ENST00000363350 107 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-116P-201ENST00000384042 109 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR660-201ENST00000385235 97 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR549A-201ENST00000385268 96 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNA5SP323-201ENST00000391094 133 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL355796.1-201ENST00000406706 323 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU2-8P-201ENST00000410727 190 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 ELOCP4-201ENST00000420090 333 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL358176.2-201ENST00000425769 204 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MTATP6P16-201ENST00000434543 526 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC112204.1-201ENST00000502591 103 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC008628.2-201ENST00000502605 298 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC113410.1-201ENST00000505029 247 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC010486.2-201ENST00000505572 483 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MTND4LP18-201ENST00000526864 291 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 Z99497.2-201ENST00000603634 310 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL031775.1-201ENST00000607014 887 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL445984.1-201ENST00000637834 659 ntBASIC0.26□□□□□ -2.37
TCRBV4S1A1TA0A5B7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU4-68P-201ENST00000364314 141 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 SNORD115-7-201ENST00000365306 82 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-533P-201ENST00000384144 107 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RN7SKP200-201ENST00000410564 320 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC016909.1-201ENST00000415916 166 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC090960.1-201ENST00000421072 306 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC012306.1-201ENST00000423267 114 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 USP9YP25-201ENST00000457708 443 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU7-90P-201ENST00000459216 62 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL049830.1-201ENST00000468034 425 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC104136.1-201ENST00000512969 394 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-1146P-201ENST00000516282 102 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-1220P-201ENST00000517126 108 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR4778-201ENST00000577635 80 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AP001836.1-201ENST00000604675 523 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL136221.1-201ENST00000621449 509 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC091925.1-201ENST00000623204 462 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC134026.1-201ENST00000623249 2239 ntBASIC0.25□□□□□ -2.37
TCRBV4S1A1TA0A5B7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MTND4P5-201ENST00000435821 1374 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-660P-201ENST00000364566 109 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-715P-201ENST00000365204 103 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-716P-201ENST00000365621 103 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 SNORD116-13-201ENST00000384408 92 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-1000P-201ENST00000391066 106 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-1093P-201ENST00000391194 107 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU2-70P-201ENST00000410718 179 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC005002.2-201ENST00000438228 269 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-917P-201ENST00000516294 104 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC090049.2-201ENST00000550377 109 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC103996.1-201ENST00000555468 102 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC146944.4-201ENST00000602697 718 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms