Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 SNORD31B-201ENST00000364977 69 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-245P-201ENST00000384020 107 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 HMGN2P39-201ENST00000398005 273 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.604-201ENST00000410574 102 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-1304P-201ENST00000411374 106 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL139156.1-201ENST00000412785 841 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL353997.1-201ENST00000432936 108 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC004386.2-201ENST00000441858 148 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNRPEP8-201ENST00000442866 260 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC009237.7-201ENST00000447357 229 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MTCO3P8-201ENST00000453691 755 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU7-152P-201ENST00000458982 64 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.653-201ENST00000459091 95 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RPL17P19-201ENST00000489069 552 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC008549.1-201ENST00000512900 643 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-991P-201ENST00000516168 107 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU7-193P-201ENST00000516723 65 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORA31.25-201ENST00000517242 134 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC087441.2-201ENST00000529141 262 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL355802.3-201ENST00000607571 545 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 ZNF204P-201ENST00000416749 2397 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-890P-201ENST00000384121 107 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORD14D-201ENST00000384390 87 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-159P-201ENST00000391080 106 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR190B-201ENST00000401119 79 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORA11.1-201ENST00000408133 129 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORD23.1-201ENST00000408212 104 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORA11.4-201ENST00000408823 129 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNA5SP270-201ENST00000411361 118 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MTCYBP10-201ENST00000424905 650 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MTND3P23-201ENST00000431980 347 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC016925.1-201ENST00000458303 298 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU7-14P-201ENST00000459331 62 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORD19B-201ENST00000459623 84 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.706-201ENST00000516933 99 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNRPGP18-201ENST00000553000 214 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SUB1P3-201ENST00000564581 315 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-874P-201ENST00000362390 105 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.67-201ENST00000362870 100 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.259-201ENST00000364619 101 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR10B-201ENST00000385011 110 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR29C-201ENST00000385231 88 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORA40.19-201ENST00000390846 128 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNA5SP213-201ENST00000391031 106 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-700P-201ENST00000391043 107 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU1-139P-201ENST00000391307 165 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR320B2-201ENST00000408479 138 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 U3.40-201ENST00000408706 208 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC245102.2-201ENST00000448956 180 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AP000870.1-201ENST00000472927 406 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR3162-201ENST00000581818 82 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR5006-201ENST00000583027 110 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL359697.1-201ENST00000624879 587 ntBASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRBV4-1A0A0J9YWV2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR340-201ENST00000362125 95 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU4-79P-201ENST00000362764 141 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.106-201ENST00000363189 100 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-1164P-201ENST00000364428 107 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-541P-201ENST00000384709 110 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR483-201ENST00000385070 76 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC123900.1-201ENST00000420390 96 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AF228730.4-201ENST00000421457 183 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RPL23AP83-201ENST00000434984 473 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RPL30P15-201ENST00000457129 321 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RPS27P21-201ENST00000486977 252 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-470P-201ENST00000515954 104 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-120P-201ENST00000516077 103 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-344P-201ENST00000516635 111 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 IGKV3-31-201ENST00000523109 329 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 ANP32BP3-201ENST00000559213 706 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 UBL5P4-201ENST00000562584 236 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC004584.2-201ENST00000570407 410 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR4795-201ENST00000584182 89 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms