Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC005176.2-201ENST00000596933 147 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AL355297.2-201ENST00000604792 129 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC022149.2-201ENST00000621061 203 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-1305P-201ENST00000364353 104 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-21P-201ENST00000384710 107 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-220P-201ENST00000390919 107 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 RNU2-63P-201ENST00000410792 194 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 RNU5A-5P-201ENST00000411054 116 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 RPL19P1-201ENST00000411635 428 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 AC117440.1-201ENST00000474107 571 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 RPL26P26-201ENST00000480251 434 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 AC110588.1-201ENST00000559699 137 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 AC011373.1-201ENST00000607270 237 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 AL449363.1-201ENST00000617815 186 ntBASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC163A0A0D9SF12 AC000403.1-201ENST00000613696 3585 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 MIR887-201ENST00000401258 79 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 RNU2-32P-201ENST00000411193 191 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 CBX3P6-201ENST00000430257 527 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 AC080013.2-201ENST00000460866 323 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 AC074133.1-201ENST00000515696 183 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-344P-201ENST00000516635 111 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 AC233702.2-202ENST00000562547 291 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 MIR2682-201ENST00000580305 110 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 AC062037.2-201ENST00000610137 73 ntBASIC3.22□□□□□ -1.89
CCDC163A0A0D9SF12 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.21□□□□□ -1.89
CCDC163A0A0D9SF12 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 AC135776.4-201ENST00000624300 1904 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-545P-201ENST00000362681 104 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.84-201ENST00000363011 104 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-1175P-201ENST00000365200 107 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 RNA5SP240-201ENST00000365355 128 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 RNU1-109P-201ENST00000383960 147 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-546P-201ENST00000383991 107 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 ELOCP21-201ENST00000412558 336 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 RAB28P5-201ENST00000427490 651 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 AC025465.3-201ENST00000510570 311 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 uc_338.1-201ENST00000612113 180 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 AC107871.2-201ENST00000612894 502 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 AC006001.4-201ENST00000622243 395 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.9
CCDC163A0A0D9SF12 AC010615.1-201ENST00000594254 1764 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 snoU2_19.2-201ENST00000363024 80 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 SNORA71.1-201ENST00000364523 117 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-234P-201ENST00000365229 104 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-472P-201ENST00000384299 107 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 AC104389.3-201ENST00000445629 235 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 RN7SL93P-201ENST00000463035 293 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 RPS29P26-201ENST00000477483 171 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 SCARNA24.2-201ENST00000516968 130 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 AC109329.2-201ENST00000519658 482 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 ELOCP29-201ENST00000588193 334 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 RPL17P51-201ENST00000605218 238 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 AC004467.1-201ENST00000615678 330 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 AC068205.3-201ENST00000636385 468 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 MTND5P6-201ENST00000422338 1798 ntBASIC3.2□□□□□ -1.9
CCDC163A0A0D9SF12 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RNU1-75P-201ENST00000347264 129 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.188-201ENST00000363952 111 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RNA5SP126-201ENST00000365092 109 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RNU2-38P-201ENST00000410856 79 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.618-201ENST00000410949 107 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RPS4XP2-201ENST00000458402 793 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 SEPT14P8-201ENST00000508026 178 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-1271P-201ENST00000517049 105 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 DEFB108E-201ENST00000524692 240 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 MIR3671-201ENST00000580455 88 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC163A0A0D9SF12 RNU1-23P-201ENST00000363361 144 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.331-201ENST00000365267 102 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms