Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 MIR4753-201ENST00000585119 83 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AL512605.2-201ENST00000592972 256 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC068790.6-201ENST00000602558 258 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AL031281.1-201ENST00000604049 488 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 PRELID3BP2-201ENST00000605362 201 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC008250.2-201ENST00000615261 205 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AL031667.3-201ENST00000620124 655 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 CASC19-280ENST00000642102 1351 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-533P-201ENST00000384144 107 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 SNORA36A-201ENST00000384221 132 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 MIR193B-201ENST00000384907 83 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 MTND3P17-201ENST00000416968 344 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 ELOCP4-201ENST00000420090 333 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AC010486.2-201ENST00000505572 483 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 SNORA70.12-201ENST00000516084 153 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-922P-201ENST00000516753 99 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AC090049.2-201ENST00000550377 109 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AL391840.1-201ENST00000571144 367 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 MIR4711-201ENST00000578274 70 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 AL121992.2-201ENST00000606262 256 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 MIR8054-201ENST00000620877 86 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.32□□□□□ -2.36
TRAV3A0A0B4J244 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-715P-201ENST00000365204 103 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 Y_RNA.504-201ENST00000384481 104 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-83P-201ENST00000384568 112 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-636P-201ENST00000384598 107 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-417P-201ENST00000384712 107 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 MIR660-201ENST00000385235 97 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-550P-201ENST00000391057 101 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 RNA5SP467-201ENST00000391274 118 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 RPS26P42-201ENST00000413485 326 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC010154.1-201ENST00000425857 269 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 SNORA25.17-201ENST00000517184 124 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 MTND4LP18-201ENST00000526864 291 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AP003072.2-201ENST00000527756 676 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 MTCO3P23-201ENST00000561363 289 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC026470.2-201ENST00000561492 181 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC004584.2-201ENST00000570407 410 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC080078.2-201ENST00000603766 501 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC091805.2-201ENST00000603848 235 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AL138960.2-201ENST00000625145 535 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AC004808.1-201ENST00000627671 721 ntBASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV3A0A0B4J244 Y_RNA.18-201ENST00000362461 102 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 RNU4-76P-201ENST00000364509 141 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-1303P-201ENST00000364841 107 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 Y_RNA.480-201ENST00000384364 102 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-163P-201ENST00000384396 106 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 RNU2-8P-201ENST00000410727 190 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 TIMM9P3-201ENST00000428659 274 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 FABP5P4-201ENST00000437203 171 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 USP9YP25-201ENST00000457708 443 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AC079140.5-201ENST00000507882 310 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AL357312.1-201ENST00000603879 298 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 MIR98-201ENST00000606724 119 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 TCL6_2.1-201ENST00000615162 119 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AC073349.3-201ENST00000617616 186 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AC005562.2-201ENST00000618264 111 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AC009878.1-201ENST00000621819 340 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AC011155.2-201ENST00000623202 216 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 AC099654.13-201ENST00000639774 207 ntBASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-660P-201ENST00000364566 109 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-169P-201ENST00000365336 107 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-116P-201ENST00000384042 109 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 MIR586-201ENST00000385035 97 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 MRPL42P2-201ENST00000403169 426 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 AC016909.1-201ENST00000415916 166 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 EXOSC3P1-201ENST00000448649 500 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 NFU1P2-201ENST00000448700 469 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 AC016717.1-201ENST00000448918 286 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 AL133217.1-201ENST00000450980 425 ntBASIC0.29□□□□□ -2.36
TRAV3A0A0B4J244 RPS20P10-201ENST00000451209 253 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms