Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 Y_RNA.527-201ENST00000384573 102 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 MTCO3P19-201ENST00000415864 321 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 AC113618.1-201ENST00000416747 285 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 CYCSP48-201ENST00000417124 323 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 AC104332.2-201ENST00000429959 156 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.54□□□□□ -2
RAI2Q9Y5P3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.54□□□□□ -2
RAI2Q9Y5P3 HMGN2P23-201ENST00000456759 269 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 RNU6-764P-201ENST00000516396 105 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 Y_RNA.720-201ENST00000517166 92 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 MIR5571-201ENST00000577998 113 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 MIR4781-201ENST00000585250 76 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.54□□□□□ -2
RAI2Q9Y5P3 AC016727.2-201ENST00000603988 621 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 AL670379.2-201ENST00000604983 252 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 AL138963.2-201ENST00000605137 226 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 U2.1-201ENST00000618978 145 ntBASIC2.54□□□□□ -2
RAI2Q9Y5P3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.54□□□□□ -2
RAI2Q9Y5P3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAI2Q9Y5P3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAI2Q9Y5P3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.54□□□□□ -2
RAI2Q9Y5P3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 AC091812.1-201ENST00000432235 1948 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 RNU6-655P-201ENST00000362858 107 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 SNORD115-32-201ENST00000364079 82 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 SNORD14.1-201ENST00000365609 90 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 RNU1-57P-201ENST00000384491 166 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 RNU6-985P-201ENST00000410182 104 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 AC097463.2-201ENST00000421074 142 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 DPH3P2-201ENST00000422618 250 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 USP9YP16-201ENST00000430287 407 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 USP9YP23-201ENST00000455085 407 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 AF186996.7-201ENST00000492781 209 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 SNORA25.11-201ENST00000515935 105 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 RNA5SP112-201ENST00000515937 99 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 SNORA40.14-201ENST00000516543 86 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 RPS29P30-201ENST00000600975 111 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 U4.3-201ENST00000621047 82 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 AC002064.3-201ENST00000623448 346 ntBASIC2.53□□□□□ -2
RAI2Q9Y5P3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RAI2Q9Y5P3 AC099654.7-201ENST00000635788 2127 ntBASIC2.53□□□□□ -2.01
RAI2Q9Y5P3 Z75746.1-201ENST00000440243 2080 ntBASIC2.53□□□□□ -2.01
RAI2Q9Y5P3 SNORD114-1-201ENST00000362705 72 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 SNORA36A-201ENST00000384221 132 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 Y_RNA.455-201ENST00000384230 98 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 MIR186-201ENST00000384988 86 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AL590556.1-201ENST00000423231 483 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC012306.1-201ENST00000423267 114 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 MTCO3P8-201ENST00000453691 755 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 MTND5P22-201ENST00000458380 195 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 RPL31P41-201ENST00000477967 372 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 SEM1P1-201ENST00000506694 209 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 RNU6-911P-201ENST00000516523 104 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 SNORA31.16-201ENST00000516773 139 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC010928.2-201ENST00000588017 287 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC008739.2-201ENST00000597006 317 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC136443.5-201ENST00000603741 370 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 Z98751.3-201ENST00000604447 521 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC124312.5-201ENST00000604451 268 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 SNORD58B-201ENST00000607313 66 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 AC087588.2-201ENST00000617667 426 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.52□□□□□ -2.01
RAI2Q9Y5P3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 RNU6-529P-201ENST00000363383 104 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 RNU6-17P-201ENST00000384245 107 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 RNU6-18P-201ENST00000384527 107 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 MIR518C-201ENST00000384822 101 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 MIR489-201ENST00000384923 84 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 SNORA26.3-201ENST00000391119 136 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 AC112492.4-201ENST00000456549 352 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 HMGB1P35-201ENST00000503360 598 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 SNORA31.6-201ENST00000516241 130 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 MIR2355-201ENST00000517199 87 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 AC022616.4-201ENST00000522985 181 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 AC079598.5-201ENST00000547460 117 ntBASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.51□□□□□ -2.01
RAI2Q9Y5P3 AC090617.3-201ENST00000573670 475 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms