Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 AC021146.4-201ENST00000309229 279 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 Y_RNA.107-201ENST00000363190 121 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 Y_RNA.221-201ENST00000364248 96 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-975P-201ENST00000384296 105 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 MIR1193-201ENST00000408109 78 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 RN7SKP167-201ENST00000411047 285 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 AC004975.1-201ENST00000428733 208 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-893P-201ENST00000458841 100 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-240P-201ENST00000516098 97 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 AC084364.2-201ENST00000546924 395 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 RNU1-30P-201ENST00000606575 163 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 AC010680.1-201ENST00000590024 3590 ntBASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB3Q9Y5E6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 Y_RNA.17-201ENST00000362433 111 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 RNA5SP22-201ENST00000365393 109 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 RNA5SP129-201ENST00000410276 118 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 AC005921.1-201ENST00000510589 286 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 RNY4P20-201ENST00000516678 93 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-1270P-201ENST00000517128 108 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 U6.73-201ENST00000619194 103 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 AC068724.3-201ENST00000625906 87 ntBASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB3Q9Y5E6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 AL672296.1-201ENST00000427780 2158 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 RNA5SP189-201ENST00000364920 115 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 SNORD61-201ENST00000384252 73 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 RNU2-49P-201ENST00000410666 184 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 AL356387.2-201ENST00000422272 243 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 AC016717.1-201ENST00000448918 286 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 RNU7-14P-201ENST00000459331 62 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 AC112771.1-201ENST00000463581 102 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 RN7SL303P-201ENST00000469773 251 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 PPBPP1-201ENST00000510807 373 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 IGLV3-26-201ENST00000520756 302 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 AC011604.1-201ENST00000545978 196 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 AC074050.1-201ENST00000563247 211 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 MIR3939-201ENST00000582614 106 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 AC096577.2-201ENST00000611455 153 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 JPX_2.1-201ENST00000614161 69 ntBASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB3Q9Y5E6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 AL031121.1-201ENST00000406553 254 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 RPL30P4-201ENST00000429309 333 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 snoU13.28-201ENST00000459235 104 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 RPS27P22-201ENST00000478056 241 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 MIR2116-201ENST00000517221 80 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 FAM71BP1-201ENST00000604431 523 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 AC091905.2-201ENST00000623143 306 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 AC011944.2-201ENST00000624440 683 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 USP8P1-201ENST00000494673 3183 ntBASIC4.35□□□□□ -1.71
PCDHB3Q9Y5E6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-888P-201ENST00000363010 101 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 Y_RNA.344-201ENST00000365381 112 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 MT-TI-201ENST00000387365 69 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 AC022137.1-201ENST00000483735 151 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 RPS26P48-201ENST00000491713 339 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms