Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.21□□□□□ -1.9
TSC22D4Q9Y3Q8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TSC22D4Q9Y3Q8 CUL1P1-201ENST00000509510 2425 ntBASIC3.21□□□□□ -1.9
TSC22D4Q9Y3Q8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TSC22D4Q9Y3Q8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TSC22D4Q9Y3Q8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.21□□□□□ -1.9
TSC22D4Q9Y3Q8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AC110491.1-201ENST00000562191 2010 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AL359693.1-201ENST00000614959 2407 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-942P-201ENST00000363002 107 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 Y_RNA.121-201ENST00000363309 113 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 Y_RNA.595-201ENST00000410403 105 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU2-52P-201ENST00000410680 190 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AC025518.1-201ENST00000479856 347 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 Y_RNA.686-201ENST00000516548 134 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-1183P-201ENST00000517054 60 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AC112693.2-201ENST00000556538 232 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AC136601.2-201ENST00000604356 474 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 AC091932.3-201ENST00000624223 323 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 MIR3658-201ENST00000636291 56 ntBASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TSC22D4Q9Y3Q8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 SNORD56.1-201ENST00000362913 68 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-275P-201ENST00000364910 107 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-142P-201ENST00000384019 107 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 SNORA40.19-201ENST00000390846 128 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-1199P-201ENST00000411249 104 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RPS29P4-201ENST00000414733 161 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RPL23AP95-201ENST00000426806 265 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 SNRPEP9-201ENST00000436794 238 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AC009237.8-201ENST00000445492 379 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-625P-201ENST00000459412 107 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AL121594.1-201ENST00000475906 575 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 Y_RNA.797-201ENST00000515977 94 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-155P-201ENST00000516347 100 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 RN7SKP282-201ENST00000516824 299 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AL138963.2-201ENST00000605137 226 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 U3.45-201ENST00000607547 219 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AC010999.1-201ENST00000611856 324 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AC004467.1-201ENST00000615678 330 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 AC008873.1-201ENST00000625051 138 ntBASIC3.19□□□□□ -1.9
TSC22D4Q9Y3Q8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-50P-201ENST00000362356 103 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 SNORA63.4-201ENST00000362763 126 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-137P-201ENST00000363680 108 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RNA5SP387-201ENST00000364226 106 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU1-33P-201ENST00000364249 162 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 MIR518D-201ENST00000385014 87 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 MIR549A-201ENST00000385268 96 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 MIR887-201ENST00000401258 79 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RNA5SP229-201ENST00000410809 99 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RPL30P13-201ENST00000418873 348 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 GPM6BP3-201ENST00000442797 145 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 Y_RNA.637-201ENST00000459424 114 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU7-121P-201ENST00000516604 62 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 AP002001.1-203ENST00000534002 267 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 AC018448.1-201ENST00000552843 316 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 MIR3922-201ENST00000585192 84 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 AC069200.1-201ENST00000609511 323 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 uc_338.1-201ENST00000612113 180 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 AC024581.2-201ENST00000619986 252 ntBASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TSC22D4Q9Y3Q8 Z83843.1-201ENST00000604070 3685 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 RNU6-1298P-201ENST00000362456 101 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 SNORD115-8-201ENST00000363856 82 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 SNORD115-38-201ENST00000365037 82 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 Y_RNA.542-201ENST00000384641 111 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 MIR449B-201ENST00000384995 97 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 RNA5SP129-201ENST00000410276 118 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 AL358075.3-201ENST00000426289 226 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 YME1L1P1-201ENST00000429435 297 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 HMGN2P31-201ENST00000432430 273 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 RPS20P10-201ENST00000451209 253 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 AP000705.1-201ENST00000454567 350 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 U8.19-201ENST00000459095 133 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
TSC22D4Q9Y3Q8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms