Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 RNU4-15P-201ENST00000362613 141 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 RNU6-1272P-201ENST00000362776 107 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 Y_RNA.308-201ENST00000365043 101 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 MIR549A-201ENST00000385268 96 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 MTCO2P33-201ENST00000402100 465 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 RPS3P1-201ENST00000456781 192 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 AC091179.1-201ENST00000461606 579 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 RPS29P26-201ENST00000477483 171 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 RPL23AP70-201ENST00000483361 460 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 RNY3P16-201ENST00000516338 101 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 AC027176.1-201ENST00000560204 514 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 MIR3162-201ENST00000581818 82 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 TCL6_2.1-201ENST00000615162 119 ntBASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SIT1Q9Y3P8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 RNU6-1210P-201ENST00000363775 107 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 U3.9-201ENST00000363823 204 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 RNU2-49P-201ENST00000410666 184 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 AL451074.5-201ENST00000415894 435 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 AC140059.1-201ENST00000489238 361 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 RNA5SP356-201ENST00000515972 94 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 RNU6-1219P-201ENST00000516143 112 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 AC006380.1-201ENST00000603598 186 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 AC005562.2-201ENST00000618264 111 ntBASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.29□□□□□ -1.88
SIT1Q9Y3P8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 RNA5SP432-201ENST00000362480 116 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 RNU6-727P-201ENST00000363592 107 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 RNU6-704P-201ENST00000364162 103 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 MIR147B-201ENST00000390185 80 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AL133475.1-201ENST00000404414 305 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 RNU6-1135P-201ENST00000411083 103 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AL139281.1-201ENST00000422120 335 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 GTF3AP2-201ENST00000557014 266 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AC025281.1-201ENST00000567026 265 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 MIR3145-201ENST00000580727 82 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 UBL5P2-201ENST00000583788 219 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 DEFB117-201ENST00000602356 141 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 SNORD11B-201ENST00000607707 90 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AL008718.3-201ENST00000610217 321 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AL078604.3-201ENST00000615580 211 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 AC068647.1-201ENST00000489539 2265 ntBASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.28□□□□□ -1.88
SIT1Q9Y3P8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.28□□□□□ -1.89
SIT1Q9Y3P8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 RNU6-454P-201ENST00000364292 107 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 SNORA71.1-201ENST00000364523 117 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 RNA5SP240-201ENST00000365355 128 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.415-201ENST00000384012 112 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 MIR186-201ENST00000384988 86 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.580-201ENST00000391004 95 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AL139095.1-201ENST00000404326 391 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AL357139.1-201ENST00000407792 426 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AC004866.1-201ENST00000411748 78 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AC024067.1-201ENST00000426199 223 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AL365496.1-201ENST00000426885 215 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 RPL23AP67-201ENST00000465341 474 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 RPS26P3-201ENST00000470205 348 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AC004057.1-201ENST00000485827 348 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 RNU6-436P-201ENST00000516171 114 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AC009127.3-201ENST00000570531 403 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 uc_338.14-201ENST00000613162 166 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms