Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RMST_3.1-201ENST00000611651 109 ntBASIC1.58□□□□□ -2.16
RNF6Q9Y252 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.58□□□□□ -2.16
RNF6Q9Y252 AC083806.3-201ENST00000614016 455 ntBASIC1.58□□□□□ -2.16
RNF6Q9Y252 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.58□□□□□ -2.16
RNF6Q9Y252 AL159152.1-201ENST00000635019 2587 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 MIR340-201ENST00000362125 95 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 RNU6-545P-201ENST00000362681 104 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 RNU6-1252P-201ENST00000363054 104 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 RNU4-75P-201ENST00000364621 146 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 MIR549A-201ENST00000385268 96 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
RNF6Q9Y252 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 RPL21P111-201ENST00000418453 477 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 DLGAP5P1-201ENST00000430307 464 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 MTATP6P26-201ENST00000445926 662 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC019235.1-201ENST00000503847 207 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC096745.1-201ENST00000509945 370 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 HMGB1P33-201ENST00000563485 527 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 SNORA59B-202ENST00000578183 701 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 RPL17P51-201ENST00000605218 238 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC104458.1-201ENST00000608243 463 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 AC092954.2-201ENST00000609103 430 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 DISC2.1-201ENST00000612827 205 ntBASIC1.57□□□□□ -2.16
RNF6Q9Y252 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF6Q9Y252 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RNF6Q9Y252 RNU1-76P-201ENST00000362903 159 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 Y_RNA.167-201ENST00000363735 109 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 RNU6-877P-201ENST00000383868 107 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RNF6Q9Y252 AL590002.1-201ENST00000406554 418 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 RNU4-62P-201ENST00000410125 130 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 Y_RNA.615-201ENST00000410769 117 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 AL645568.3-201ENST00000433683 316 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 AC007395.1-201ENST00000451333 677 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.56□□□□□ -2.16
RNF6Q9Y252 MTCO1P29-201ENST00000496868 288 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.56□□□□□ -2.16
RNF6Q9Y252 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.56□□□□□ -2.16
RNF6Q9Y252 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.56□□□□□ -2.16
RNF6Q9Y252 FAM157A-202ENST00000615155 405 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.56□□□□□ -2.16
RNF6Q9Y252 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.56□□□□□ -2.16
RNF6Q9Y252 AC068137.3-201ENST00000639191 341 ntBASIC1.56□□□□□ -2.16
RNF6Q9Y252 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RNF6Q9Y252 RNU6-522P-201ENST00000364497 107 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 RNU6-1286P-201ENST00000383871 107 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 RNU6-439P-201ENST00000384188 106 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 RNU6-790P-201ENST00000384479 105 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RNF6Q9Y252 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC016925.1-201ENST00000458303 298 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC010409.1-201ENST00000487382 476 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.55□□□□□ -2.16
RNF6Q9Y252 SNORA31.17-201ENST00000516953 127 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC016256.1-201ENST00000547971 354 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 ZNF519P2-201ENST00000557032 169 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.55□□□□□ -2.16
RNF6Q9Y252 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF6Q9Y252 MIR5006-201ENST00000583027 110 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC016727.2-201ENST00000603988 621 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 MIR3976-201ENST00000606807 139 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 AC022513.1-201ENST00000624512 117 ntBASIC1.55□□□□□ -2.16
RNF6Q9Y252 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF6Q9Y252 RNU6-418P-201ENST00000384035 107 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RNF6Q9Y252 AC016907.1-201ENST00000419483 435 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AL358453.1-201ENST00000422522 250 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AC004386.2-201ENST00000441858 148 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AC010531.2-201ENST00000465012 153 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
RNF6Q9Y252 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
RNF6Q9Y252 RNU6-506P-201ENST00000516553 94 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 DEFB131C-201ENST00000528817 165 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF6Q9Y252 SUB1P4-201ENST00000566062 339 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AC100830.2-201ENST00000581636 240 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AP000907.4-201ENST00000604143 237 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 MIR8076-201ENST00000611401 83 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 RMST_6.1-201ENST00000611980 203 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AC005562.2-201ENST00000618264 111 ntBASIC1.54□□□□□ -2.16
RNF6Q9Y252 AC121333.1-201ENST00000567488 2709 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms