Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 AC020914.4-201ENST00000597690 277 ntBASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-727P-201ENST00000363592 107 ntBASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-882P-201ENST00000391025 103 ntBASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 AP000873.1-201ENST00000463987 400 ntBASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-1018P-201ENST00000516577 106 ntBASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-572P-201ENST00000516724 80 ntBASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 SCARNA14-201ENST00000516903 136 ntBASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 uc_338.32-201ENST00000615087 172 ntBASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDZRN3Q9UPQ7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 NDUFB4P4-201ENST00000404822 243 ntBASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 AC126124.2-201ENST00000413542 321 ntBASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 RN7SL93P-201ENST00000463035 293 ntBASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 RPL32P34-201ENST00000486380 400 ntBASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDZRN3Q9UPQ7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 RNU1-18P-201ENST00000363062 164 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 RNY1P1-201ENST00000364372 112 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-776P-201ENST00000364403 104 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-1022P-201ENST00000365049 104 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-242P-201ENST00000384359 107 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-24P-201ENST00000384440 107 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 GPM6BP3-201ENST00000442797 145 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 AL021397.1-201ENST00000451806 248 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 RNU4-60P-201ENST00000517239 135 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 AL356157.2-201ENST00000605122 111 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 AC027309.3-201ENST00000623419 351 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 MIR4662A-201ENST00000637499 67 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 AL589743.1-201ENST00000551932 2712 ntBASIC4.85□□□□□ -1.63
PDZRN3Q9UPQ7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 Y_RNA.73-201ENST00000362910 113 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 Y_RNA.78-201ENST00000362970 110 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-1264P-201ENST00000383891 107 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 MIR549A-201ENST00000385268 96 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 SNORA48.5-201ENST00000391143 135 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 SNORD105B-201ENST00000458770 79 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 TRBV12-2-201ENST00000489763 344 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 AC104619.4-201ENST00000510773 249 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.84□□□□□ -1.63
PDZRN3Q9UPQ7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PDZRN3Q9UPQ7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.84□□□□□ -1.64
PDZRN3Q9UPQ7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 MIR302B-201ENST00000362188 73 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 RNU6-799P-201ENST00000363567 107 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.313-201ENST00000365095 103 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 MIR218-2-201ENST00000385006 110 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 RPS26P42-201ENST00000413485 326 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 ANP32BP2-201ENST00000454525 545 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 AC091826.1-201ENST00000514065 313 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 RNU6-904P-201ENST00000516206 101 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 RNA5SP309-201ENST00000516670 106 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 IGLL4P-201ENST00000614590 133 ntBASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDZRN3Q9UPQ7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms