Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SUB1P3-201ENST00000564581 315 ntBASIC2.57□□□□□ -2
HDAC6Q9UBN7 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
HDAC6Q9UBN7 AC080078.3-201ENST00000605407 463 ntBASIC2.57□□□□□ -2
HDAC6Q9UBN7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.57□□□□□ -2
HDAC6Q9UBN7 AC005014.2-201ENST00000607795 599 ntBASIC2.57□□□□□ -2
HDAC6Q9UBN7 AC067747.1-201ENST00000608026 250 ntBASIC2.57□□□□□ -2
HDAC6Q9UBN7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.57□□□□□ -2
HDAC6Q9UBN7 AC005336.3-201ENST00000623833 2679 ntBASIC2.57□□□□□ -2
HDAC6Q9UBN7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HDAC6Q9UBN7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDAC6Q9UBN7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 RNU1-72P-201ENST00000362976 153 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 RNU6-137P-201ENST00000363680 108 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 RNU6-331P-201ENST00000384724 107 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 MIR153-2-201ENST00000385225 87 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.56□□□□□ -2
HDAC6Q9UBN7 MIR320B2-201ENST00000408479 138 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 AC099799.1-201ENST00000439809 192 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.56□□□□□ -2
HDAC6Q9UBN7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 AL139109.1-201ENST00000455491 297 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 AC087477.1-201ENST00000465747 340 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 RNU6-586P-201ENST00000517265 104 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 MRPS36P4-201ENST00000534436 298 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 SNRPGP18-201ENST00000553000 214 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 MIR5701-3-201ENST00000578890 82 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 MIR5701-1-201ENST00000585138 82 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 RPL17P51-201ENST00000605218 238 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 MIR5701-2-201ENST00000615634 82 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 AC090971.5-201ENST00000621102 293 ntBASIC2.56□□□□□ -2
HDAC6Q9UBN7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HDAC6Q9UBN7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.56□□□□□ -2
HDAC6Q9UBN7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
HDAC6Q9UBN7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.55□□□□□ -2
HDAC6Q9UBN7 SNORD114-1-201ENST00000362705 72 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 U3.9-201ENST00000363823 204 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 RNU6-220P-201ENST00000390919 107 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 HMGB3P2-201ENST00000411913 584 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 HMGN2P3-201ENST00000433603 273 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 RPS15AP28-201ENST00000435088 386 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 HMGN2P5-201ENST00000436882 273 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC018634.1-201ENST00000437554 401 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC006026.1-201ENST00000444025 1803 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 AF186996.7-201ENST00000492781 209 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC022493.2-201ENST00000506122 481 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 RNU7-4P-201ENST00000516961 62 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC091144.1-201ENST00000519573 138 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDAC6Q9UBN7 AC090517.3-201ENST00000625170 141 ntBASIC2.55□□□□□ -2
HDAC6Q9UBN7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
HDAC6Q9UBN7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HDAC6Q9UBN7 SNORA36A-201ENST00000384221 132 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 MIR625-201ENST00000385047 85 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 MIR95-201ENST00000385072 81 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 MIR764-201ENST00000390811 85 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 Y_RNA.579-201ENST00000390939 94 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 SNORA12.2-201ENST00000391040 156 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 MIR208B-201ENST00000401172 77 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 RNA5SP201-201ENST00000410316 124 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.54□□□□□ -2
HDAC6Q9UBN7 CBX3P6-201ENST00000430257 527 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AL353997.1-201ENST00000432936 108 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AL161788.1-201ENST00000441805 169 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 RNA5SP54-201ENST00000516951 92 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AC023442.1-201ENST00000531247 422 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AC004584.2-201ENST00000570407 410 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AL078605.1-201ENST00000603529 500 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AL713866.2-201ENST00000603579 219 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.54□□□□□ -2
HDAC6Q9UBN7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.54□□□□□ -2
HDAC6Q9UBN7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.54□□□□□ -2
HDAC6Q9UBN7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.54□□□□□ -2
HDAC6Q9UBN7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDAC6Q9UBN7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDAC6Q9UBN7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDAC6Q9UBN7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 RNU4-15P-201ENST00000362613 141 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 Y_RNA.48-201ENST00000362710 103 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 SNORD115-8-201ENST00000363856 82 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 SNORD115-38-201ENST00000365037 82 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.53□□□□□ -2
HDAC6Q9UBN7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.53□□□□□ -2
HDAC6Q9UBN7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.53□□□□□ -2
HDAC6Q9UBN7 AL353752.1-201ENST00000454946 260 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 snoU13.23-201ENST00000458863 104 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 AC132942.1-201ENST00000486753 483 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 AC145146.1-201ENST00000496370 254 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms