Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SNORA31.15-201ENST00000516771 132 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 RNU6-1213P-201ENST00000517075 94 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 Y_RNA.718-201ENST00000517110 102 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.46□□□□□ -1.86
USP35Q9P2H5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP35Q9P2H5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
USP35Q9P2H5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP35Q9P2H5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
USP35Q9P2H5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
USP35Q9P2H5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
USP35Q9P2H5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
USP35Q9P2H5 MIR26A1-201ENST00000362205 77 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 RNU4-73P-201ENST00000363164 141 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 Y_RNA.405-201ENST00000383979 100 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 Y_RNA.451-201ENST00000384200 100 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 SNORD116-29-201ENST00000384516 83 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 Y_RNA.524-201ENST00000384564 100 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 Y_RNA.561-201ENST00000384694 100 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 AC022028.1-201ENST00000412054 408 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 AL137159.1-201ENST00000452808 512 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 RPL17P19-201ENST00000489069 552 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 RPS23P5-201ENST00000495419 428 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.45□□□□□ -1.86
USP35Q9P2H5 AC093303.1-201ENST00000514549 295 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 Y_RNA.676-201ENST00000516393 96 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 Y_RNA.706-201ENST00000516933 99 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 RNU6-58P-201ENST00000517143 103 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.45□□□□□ -1.86
USP35Q9P2H5 AC027288.2-201ENST00000553028 243 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 MIR4635-201ENST00000583759 79 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 SNORD14A-201ENST00000606526 91 ntBASIC3.45□□□□□ -1.86
USP35Q9P2H5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
USP35Q9P2H5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
USP35Q9P2H5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
USP35Q9P2H5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 MIR518C-201ENST00000384822 101 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.44□□□□□ -1.86
USP35Q9P2H5 RPL23AP50-201ENST00000434149 455 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 AC245102.2-201ENST00000448956 180 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 PRELID3BP1-201ENST00000457142 540 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 RNU7-152P-201ENST00000458982 64 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 SNORD19B-201ENST00000459623 84 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 RN7SL636P-201ENST00000497504 294 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 MIR4446-201ENST00000578505 67 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 AC245884.12-201ENST00000615364 59 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.44□□□□□ -1.86
USP35Q9P2H5 U4.3-201ENST00000621047 82 ntBASIC3.44□□□□□ -1.86
USP35Q9P2H5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.44□□□□□ -1.86
USP35Q9P2H5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.43□□□□□ -1.86
USP35Q9P2H5 MIR27B-201ENST00000385129 97 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 SNORA40.19-201ENST00000390846 128 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 AC027124.2-201ENST00000428249 105 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 HMGN2P3-201ENST00000433603 273 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 HMGN2P5-201ENST00000436882 273 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 MIR449C-201ENST00000516047 92 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 RNA5SP282-201ENST00000516355 108 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 RNU6-1098P-201ENST00000516772 96 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 RNU6-548P-201ENST00000517083 115 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 SUB1P3-201ENST00000564581 315 ntBASIC3.43□□□□□ -1.86
USP35Q9P2H5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.43□□□□□ -1.86
USP35Q9P2H5 SNORA18.2-201ENST00000383865 132 ntBASIC3.42□□□□□ -1.86
USP35Q9P2H5 RNU6-541P-201ENST00000384709 110 ntBASIC3.42□□□□□ -1.86
USP35Q9P2H5 RNA5SP181-201ENST00000410246 98 ntBASIC3.42□□□□□ -1.86
USP35Q9P2H5 RNU6-991P-201ENST00000516168 107 ntBASIC3.42□□□□□ -1.86
USP35Q9P2H5 RNU6-264P-201ENST00000517134 104 ntBASIC3.42□□□□□ -1.86
USP35Q9P2H5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.42□□□□□ -1.86
USP35Q9P2H5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.42□□□□□ -1.86
USP35Q9P2H5 AC233702.2-202ENST00000562547 291 ntBASIC3.42□□□□□ -1.86
USP35Q9P2H5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.42□□□□□ -1.86
USP35Q9P2H5 MTND4LP32-201ENST00000636111 270 ntBASIC3.42□□□□□ -1.86
USP35Q9P2H5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP35Q9P2H5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP35Q9P2H5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP35Q9P2H5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP35Q9P2H5 RNU6-482P-201ENST00000391068 107 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 AL135786.1-201ENST00000415892 214 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 AC007098.1-201ENST00000420122 367 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 MTCO3P29-201ENST00000432119 779 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 AL353997.1-201ENST00000432936 108 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 AC009237.7-201ENST00000447357 229 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.41□□□□□ -1.86
USP35Q9P2H5 RPL30P15-201ENST00000457129 321 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 RNU2-44P-201ENST00000516795 194 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 RNA5SP490-201ENST00000517141 136 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 RNA5SP402-201ENST00000517148 110 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 DEFB131C-201ENST00000528817 165 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 AC093027.1-201ENST00000546698 429 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.41□□□□□ -1.86
USP35Q9P2H5 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.41□□□□□ -1.86
USP35Q9P2H5 Y_RNA.67-201ENST00000362870 100 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 Y_RNA.99-201ENST00000363138 105 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 RNU6-280P-201ENST00000364145 104 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 SNORD31B-201ENST00000364977 69 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 RNU6-890P-201ENST00000384121 107 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 MIR29C-201ENST00000385231 88 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 MIR524-201ENST00000385242 87 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 RNU6-159P-201ENST00000391080 106 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms