Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CNTN3Q9P232 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN3Q9P232 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CNTN3Q9P232 AL049781.1-201ENST00000623195 3585 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 AC069528.2-201ENST00000624849 1991 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CNTN3Q9P232 MIR423-201ENST00000362201 94 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 RNU6-899P-201ENST00000363947 107 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 SNORA18.2-201ENST00000383865 132 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 RNU6-376P-201ENST00000384731 106 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 RNA5SP354-201ENST00000391247 136 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 AL355497.1-201ENST00000406262 551 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 RHEBP3-201ENST00000411920 351 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 AC093578.1-201ENST00000415219 368 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN3Q9P232 AC110768.1-201ENST00000509222 400 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 SNORD116-25-201ENST00000516517 92 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 AC025281.1-201ENST00000567026 265 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 MIR5688-201ENST00000580619 83 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 AL137843.1-201ENST00000605078 385 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 U3.45-201ENST00000607547 219 ntBASIC3.91□□□□□ -1.78
CNTN3Q9P232 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN3Q9P232 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN3Q9P232 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN3Q9P232 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN3Q9P232 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN3Q9P232 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN3Q9P232 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.9□□□□□ -1.78
CNTN3Q9P232 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNTN3Q9P232 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CNTN3Q9P232 RNU6-151P-201ENST00000364158 107 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 Y_RNA.368-201ENST00000365547 113 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 RNU1-57P-201ENST00000384491 166 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 MIR626-201ENST00000385032 94 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 RNU6-578P-201ENST00000390980 103 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 RNU6-1154P-201ENST00000391001 104 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 Y_RNA.586-201ENST00000391146 98 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 SNORA26.5-201ENST00000391215 123 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CNTN3Q9P232 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 Z98941.1-201ENST00000407764 100 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 RNA5SP504-201ENST00000410676 117 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 YME1L1P1-201ENST00000429435 297 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 AC010409.1-201ENST00000487382 476 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 SRIP1-201ENST00000489235 288 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CNTN3Q9P232 RNU1-117P-201ENST00000517041 158 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 uc_338.14-201ENST00000613162 166 ntBASIC3.9□□□□□ -1.79
CNTN3Q9P232 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CNTN3Q9P232 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CNTN3Q9P232 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CNTN3Q9P232 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.9□□□□□ -1.79
CNTN3Q9P232 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTN3Q9P232 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTN3Q9P232 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.89□□□□□ -1.79
CNTN3Q9P232 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTN3Q9P232 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTN3Q9P232 SNORA72.4-201ENST00000384174 132 ntBASIC3.89□□□□□ -1.79
CNTN3Q9P232 Y_RNA.456-201ENST00000384232 111 ntBASIC3.89□□□□□ -1.79
CNTN3Q9P232 MIR767-201ENST00000390228 109 ntBASIC3.89□□□□□ -1.79
CNTN3Q9P232 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.89□□□□□ -1.79
CNTN3Q9P232 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.89□□□□□ -1.79
CNTN3Q9P232 SNORA70.18-201ENST00000516696 98 ntBASIC3.89□□□□□ -1.79
CNTN3Q9P232 DEFB131C-201ENST00000528817 165 ntBASIC3.89□□□□□ -1.79
CNTN3Q9P232 MIR548X2-201ENST00000579776 100 ntBASIC3.89□□□□□ -1.79
CNTN3Q9P232 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CNTN3Q9P232 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNTN3Q9P232 Y_RNA.293-201ENST00000364908 93 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 SNORA67.2-201ENST00000384300 149 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 MIR7-3-201ENST00000384898 110 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 MIR218-2-201ENST00000385006 110 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 RBMY2UP-201ENST00000453474 324 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 SNORA70.12-201ENST00000516084 153 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 RNU6-579P-201ENST00000516879 102 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.88□□□□□ -1.79
CNTN3Q9P232 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.88□□□□□ -1.79
CNTN3Q9P232 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.88□□□□□ -1.79
CNTN3Q9P232 AC069294.1-201ENST00000608397 350 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 AC019176.2-201ENST00000611579 315 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 Y_RNA.802-201ENST00000614892 130 ntBASIC3.88□□□□□ -1.79
CNTN3Q9P232 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CNTN3Q9P232 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.88□□□□□ -1.79
CNTN3Q9P232 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNTN3Q9P232 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.87□□□□□ -1.79
CNTN3Q9P232 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CNTN3Q9P232 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.87□□□□□ -1.79
CNTN3Q9P232 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CNTN3Q9P232 Y_RNA.341-201ENST00000365341 102 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 Y_RNA.361-201ENST00000365515 120 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 MIR183-201ENST00000384958 110 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 RNU6-1168P-201ENST00000390831 104 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 DBIP2-201ENST00000419076 262 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 AC002075.2-201ENST00000425207 252 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 AL135790.2-201ENST00000437701 267 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 AC146507.2-201ENST00000460608 476 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 RN7SL293P-201ENST00000481765 281 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 AC107027.2-201ENST00000512197 115 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 AC079598.5-201ENST00000547460 117 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 MIR7851-201ENST00000610611 160 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 AC008873.1-201ENST00000625051 138 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms