Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AP001506.1-201ENST00000615444 211 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU6-533P-201ENST00000384144 107 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU6-456P-201ENST00000384493 107 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU6-692P-201ENST00000384496 107 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 EIF1P1-201ENST00000421436 341 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 BET1P1-201ENST00000482276 359 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC016632.1-201ENST00000503994 196 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU6-123P-201ENST00000516163 102 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 SNORD27.1-201ENST00000516319 72 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RN7SKP287-201ENST00000516546 266 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 SUMO2P18-201ENST00000518873 252 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC016957.1-201ENST00000534895 309 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC011712.1-201ENST00000588959 234 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC064872.1-201ENST00000604823 1072 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC243829.6-201ENST00000612652 106 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC008147.4-201ENST00000617570 1204 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC097372.5-201ENST00000623665 376 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC009033.1-201ENST00000624279 431 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AL603839.4-201ENST00000624658 1005 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 ELL2P3-201ENST00000457883 1602 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU6-716P-201ENST00000365621 103 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 SNORA48.1-201ENST00000390879 135 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 SNORA26.8-201ENST00000391306 124 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 MIR1283-1-201ENST00000408494 87 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RN7SKP61-201ENST00000410642 295 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC245047.4-201ENST00000433189 144 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 DYNLT3P2-201ENST00000442517 295 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU7-138P-201ENST00000459479 64 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 MTCO3P38-201ENST00000468910 766 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC116562.3-201ENST00000506136 177 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 SNORD116-28-201ENST00000516123 91 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU6-1069P-201ENST00000516612 133 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNA5SP437-201ENST00000517249 129 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC068587.5-201ENST00000528506 175 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC005730.3-201ENST00000583067 366 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.69□□□□□ -2.3
CCDC88CQ9P219 AC124864.2-201ENST00000624736 186 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 MIR6863-201ENST00000636112 90 ntBASIC0.69□□□□□ -2.3
CCDC88CQ9P219 RNU6-1235P-201ENST00000384559 107 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 SNORD70.1-201ENST00000391007 85 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 SNORA12.2-201ENST00000391040 156 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 RNU6-550P-201ENST00000391057 101 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 RNU1-139P-201ENST00000391307 165 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC88CQ9P219 RNU7-182P-201ENST00000459009 62 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 RNU6-498P-201ENST00000459468 107 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC117454.1-201ENST00000491120 168 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 RNU6-1178P-201ENST00000516674 107 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC88CQ9P219 HSPE1P4-201ENST00000550617 308 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC145350.1-201ENST00000567426 208 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 MIR4775-201ENST00000581168 75 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC078795.3-201ENST00000602913 472 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC025449.1-201ENST00000603896 529 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 AC022418.1-201ENST00000624118 445 ntBASIC0.68□□□□□ -2.3
CCDC88CQ9P219 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 FGF7P2-201ENST00000332473 296 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 SNORA25-201ENST00000384384 134 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU6-541P-201ENST00000384709 110 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU6-332P-201ENST00000391193 108 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AL133396.1-201ENST00000432048 687 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 PGBD4P5-201ENST00000445958 426 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AL122001.1-201ENST00000457027 370 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU7-40P-201ENST00000516397 64 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 SNORD60.2-201ENST00000516883 86 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU6-232P-201ENST00000517144 64 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC087854.1-201ENST00000519706 414 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AP002963.1-201ENST00000530590 184 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC007834.2-201ENST00000536310 343 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AL442163.3-201ENST00000554110 156 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms