Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MFSD8-236ENST00000641509 4050 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 AC110491.1-201ENST00000562191 2010 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 IPO8P1-201ENST00000455509 3109 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 RNA5SP374-201ENST00000362939 125 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 RNA5SP197-201ENST00000363357 119 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 RNU6-137P-201ENST00000363680 108 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 RNU6-275P-201ENST00000364910 107 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 MIR549A-201ENST00000385268 96 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 RPL23AP58-201ENST00000440453 469 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AL357134.1-201ENST00000445848 426 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 RNU7-197P-201ENST00000458836 62 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AC090877.1-201ENST00000561418 344 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AL451007.1-201ENST00000595491 289 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 AC004467.1-201ENST00000615678 330 ntBASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LMCD1Q9NZU5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 SNORA80A-201ENST00000363922 136 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 RNU6-899P-201ENST00000363947 107 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 Y_RNA.369-201ENST00000365568 117 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 SNORA22-201ENST00000383907 134 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 Y_RNA.498-201ENST00000384460 102 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 MIR607-201ENST00000385241 96 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 MIR513C-201ENST00000401352 84 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 AC074117.2-201ENST00000417130 397 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 AC074290.1-201ENST00000448883 135 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 RNU7-107P-201ENST00000459121 61 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 RNU6-625P-201ENST00000459412 107 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 RN7SL504P-201ENST00000494496 287 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 AC019159.1-201ENST00000605094 187 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 AL162274.2-201ENST00000614406 332 ntBASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.77□□□□□ -1.81
LMCD1Q9NZU5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 CUL1P1-201ENST00000509510 2425 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 Z83843.1-201ENST00000604070 3685 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 MIR591-201ENST00000385290 95 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 RNU4-47P-201ENST00000410876 114 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AC007969.2-201ENST00000441891 191 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 RPS29P31-201ENST00000446147 164 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AP002884.2-201ENST00000471647 395 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AC005921.1-201ENST00000510589 286 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 RNU2-58P-201ENST00000516403 183 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AC018448.1-201ENST00000552843 316 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 MIR5571-201ENST00000577998 113 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 MIR4276-201ENST00000584832 70 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 AC023043.3-201ENST00000593113 385 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 DNAJC19P2-201ENST00000593340 302 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 DEFB117-201ENST00000602356 141 ntBASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMCD1Q9NZU5 MTND5P35-201ENST00000557537 1720 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 RNU6-600P-201ENST00000362524 99 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 Y_RNA.172-201ENST00000363765 102 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 RNA5SP189-201ENST00000364920 115 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 RNU4-17P-201ENST00000365598 141 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 SNORA40.19-201ENST00000390846 128 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC092047.1-201ENST00000424997 240 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AP000705.1-201ENST00000454567 350 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC092185.1-201ENST00000491371 97 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC016632.1-201ENST00000503994 196 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 RNU6-155P-201ENST00000516347 100 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 IGKV2-26-201ENST00000518305 343 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms