Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 MIR4272-201ENST00000635924 64 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 SNORD98-201ENST00000636377 67 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AC005592.1-201ENST00000566527 1640 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SMARCAL1Q9NZC9 Z75746.1-201ENST00000440243 2080 ntBASIC2.4□□□□□ -2.02
SMARCAL1Q9NZC9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-222P-201ENST00000362438 107 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.106-201ENST00000363189 100 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.358-201ENST00000365491 99 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 MIR186-201ENST00000384988 86 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AIMP1P2-201ENST00000425294 312 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 RNU7-26P-201ENST00000458980 63 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 U8.22-201ENST00000459141 133 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 HMGB3P3-201ENST00000510526 400 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-1045P-201ENST00000516321 107 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.706-201ENST00000516933 99 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 RNU7-4P-201ENST00000516961 62 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC109329.2-201ENST00000519658 482 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC115990.1-201ENST00000526957 301 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC079598.5-201ENST00000547460 117 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC021231.3-201ENST00000558497 370 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC006600.1-201ENST00000572529 153 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 MIR5188-201ENST00000583467 113 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 MIR3616-201ENST00000584070 92 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 MIR4765-201ENST00000585007 77 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AC100812.1-201ENST00000607622 580 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 AL359854.1-201ENST00000614203 1594 ntBASIC2.4□□□□□ -2.03
SMARCAL1Q9NZC9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-450P-201ENST00000364654 107 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-17P-201ENST00000384245 107 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-18P-201ENST00000384527 107 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 SNORA69.1-201ENST00000390904 137 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 SNORA26.3-201ENST00000391119 136 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 MTCYBP2-201ENST00000407745 171 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 CYCSP48-201ENST00000417124 323 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC097463.2-201ENST00000421074 142 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC012306.1-201ENST00000423267 114 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 RPL22P13-201ENST00000493291 347 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-1046P-201ENST00000516538 107 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC144568.1-201ENST00000520139 137 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC023442.1-201ENST00000531247 422 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC021269.2-201ENST00000532318 330 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC073410.2-201ENST00000603240 332 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 Z98751.3-201ENST00000604447 521 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 MIR7515-201ENST00000637837 67 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
SMARCAL1Q9NZC9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.145-201ENST00000363527 102 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-708P-201ENST00000384217 107 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 U8.10-201ENST00000384260 133 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 RNU1-57P-201ENST00000384491 166 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 MIR549A-201ENST00000385268 96 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-985P-201ENST00000410182 104 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.592-201ENST00000410274 109 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 AC009963.1-201ENST00000417265 157 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 AL445305.1-201ENST00000432577 575 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 snoU13.14-201ENST00000459372 104 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 MTND5P16-201ENST00000460269 1703 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 AL121594.1-201ENST00000475906 575 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 HMGB1P35-201ENST00000503360 598 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 AC109329.1-201ENST00000518744 317 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 GNAI2P1-201ENST00000541815 315 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 AC016256.1-201ENST00000547971 354 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 U2.1-201ENST00000618978 145 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms